KEGG   Oncorhynchus nerka (sockeye salmon): 115119673
Entry
115119673         CDS       T07952                                 
Symbol
rev1
Name
(RefSeq) DNA repair protein REV1 isoform X1
  KO
K03515  DNA repair protein REV1 [EC:2.7.7.-]
Organism
one  Oncorhynchus nerka (sockeye salmon)
Pathway
one03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:one00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    115119673 (rev1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:one03400]
    115119673 (rev1)
DNA repair and recombination proteins [BR:one03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Y-family DNA polymerases
    115119673 (rev1)
SSDB
Motif
Pfam: IMS IMS_HHH_1 IMS_C REV1_C BRCT_2 UBM BRCT POLH-Rev1_HhH LIG3_BRCT IMS_HHH PTCB-BRCT Cdd1 HHH_5 DUF7674 DUF1805
Other DBs
NCBI-GeneID: 115119673
NCBI-ProteinID: XP_029504424
LinkDB
Position
LG1:complement(21500885..21519257)
AA seq 1495 aa
MSRDGRRKRDRDDNGWASRGGYMAAKVSKLDEQFKMDAPREKQKDGVCSSIFTGVAIYVN
GYTDPSADELRRLMMLHGGQFHMYYSHSKTTHIIATNLPNSKIQELRDQKVVRPEWITDS
IKAGHLLSYLQYQLYAKQKGLSFPSVSVRQGQEAAGLSHGQTQPSHSLPVPSLNNLIPVL
SNPSPSLGKPLSSHSHLHIDNLLPQPNQCNPLAGDLNPQPRHFSPGHCFLSPYSSNHLYS
DPGHIPHHPPSQGQAKPGCIQPLAPADTHLQTPGPIPAHPSHEHSKPGHAQPQSSLSFSN
HLQHSYRDLDFRLNGSLLTYDKMRTAQINWVQEGGGEDPCPVRPTRGATDPPLTNGHTHP
VNGALKPLDLSPNPTLPTDTPLNPDRKSTGGSVSLHPASPLSNSPLKSDPPKLLHSPPRN
PTPPPVSHHRHHEQLANEQRPKPPPPTYQEATAALASRPLVLPPPKPRQSDSPPENPLPL
DNPNLSTSPVRLNGSHHNAFTPSPAPLETNSLSAIPSNPTPPDSDHQSVLAKTGGIISEF
YSHSRLHHISTWRSEFSEYVNTLQSRRRATGGATFPGRDRLKRQRREGLSAAPGPQSCIL
HVDMDCFFVSVGIRHRPDLKGKPVAVTSNRGPGRVAQRPGVDRQLELQYYQRKYSHAGVS
ERKDGELEEMTSAESHVSHGNGVEPDTTCLSMAEIASCSYEARQAGVRNGMFFGQAKQLC
PSLQSVPYDFQAYKEVALAMYETLASYTHNIEALSCDEALVDCSALLAELGATPEELASA
IRTDVRERTGCTASVGMGSNILLARMATRKAKPDGQYLLRSEEVDDFIRDHRVTSLPGVG
RSMGAKLASLGVRSCGDLQQVSLQQLQKEFGPRTGQTLFRFCRGLDDRPVRSEKERKSVS
AEMNYNIRFTQVDEAESFLTNLSMEVQKRLQGAGLRGRRLTLKVMVRKVGAPVEPSKYGG
HGICDNLARSVTLAQSTDSGQLIASEVIKLFHSMRLEVQDLRGVGLQVQLLDGAHSAPYD
PSGPKTRSIRDMLLAQRPPAQHNHTDSLADAPVADSTTNQGKSSSARVPPPFSTLCPPSP
ADPIPGTSKEEPLPSTRTPNHVRTRLNLSIEVPSPSQVDRSVLDALPAELREQVERSWTH
REKERSHNGSHHRPSSPHPSSLLSSPSSPPTPAALPVGTLVLQIPNQPGQPGSTGIILEL
PDFSQVDPEVFAALPRELQEELRSAYSRRETAQAQGIIMAEQRNPLLQLKQVGVGRVKRR
YKKKNTNSSPIKKGPSPLKRPHPPGNSPAKALQHPLRPRDLSNGLKLENGPSTSSLKQDV
PETLSKFTPRPEPTLAGACDFTDIRTLLREWVTTISEPMEEDILQVVKYCTDLIEDKDLE
KLDLVIKYMKRLMQQSVESVWSMAFDFILDNVQVDTELQWCEVASSPSTTLMRKSRRRQY
YIALDSYYVTCRCRVDDMVVLKWFLLYLIHDHITGRARRNYLIGQCTCLSRLTRA
NT seq 4488 nt   +upstreamnt  +downstreamnt
atgagtcgagatgggcggaggaagagggacagggatgacaacggttgggcctccaggggt
ggctacatggctgctaaggtgtccaagctggatgagcagtttaagatggacgcccccaga
gagaaacagaaagatggagtctgctctagcatcttcactggggtggccatatatgtcaac
gggtacacagaccccagtgcggacgagctgcgcaggctgatgatgctgcatgggggtcag
tttcacatgtactactcccactccaagacaacccacataatcgccaccaacctgcccaac
agcaagatacaggagctgagggaccagaaggtggtccggccggagtggatcactgacagt
atcaaggctggccatctcctgtcctacctgcagtaccagctctatgccaagcagaaaggc
ctgagcttccccagtgtgtctgttcgccagggccaggaggctgcaggactcagccacggg
caaacccaacccagccacagcctccctgtacccagcctcaataacctcatacctgtcctc
agcaatccatcccccagccttgggaagcccctatccagccacagtcatttacacatagac
aatctcctcccccagcccaaccagtgtaacccgctagctggtgacctcaacccccagccc
agacactttagcccaggacactgctttctcagcccctactcctccaatcacctctactct
gacccaggacacatcccccaccacccacccagccaagggcaggccaagccaggctgcatc
cagcctcttgctccagccgacacccacttacagacccccggtcccatcccagctcacccc
agccatgagcactctaaacctgggcacgcacaacctcagtccagcctctccttctccaac
cacctccagcacagctaccgggatctggacttcagactaaatggatcattactgacctat
gacaaaatgagaaccgcccaaataaactgggtgcaagaggggggcggtgaggacccctgt
cctgtcagacccacaagaggggcaacggacccccctctgaccaatggtcacacccaccct
gtgaatggtgccttaaagcctctggatctctcccccaaccccacactacccacagacaca
cccctgaaccctgacaggaagtccacgggggggtctgtgtccctgcatcctgccagcccc
ctatccaactctcctttgaaatctgacccccccaaacttctccacagcccccccaggaac
ccaactcctccccctgtgtctcaccacagacaccacgaacaactggccaatgaacagcga
cccaaacctccgccgcccacctatcaggaggcgacggctgccttggcgtcccgccccctc
gttctcccaccgccgaagccccgtcaatcagattcccctcctgagaaccccctccccctt
gataacccaaacctctccacttcccctgtccgtctgaatggcagtcaccacaatgccttt
acacctagccccgcccctcttgaaaccaacagcttatcagctattccctcaaatcccacc
cctccagacagtgaccaccaatcagtactggcgaagaccggggggatcatctcagagttc
tactcccactctcgtctacatcacatctccacgtggaggagtgagttctctgagtatgtc
aacacgctgcagagcaggaggagggccacagggggcgccacattccccgggagagacagg
ctcaaacgccagaggagagagggtttgtcagctgctcctggccctcagtcctgtatcctg
catgtggacatggactgtttctttgtctctgtggggatcagacacaggcccgacctcaaa
gggaagccagtagctgtgaccagtaaccgtggtccaggcagagtggcccagagacctggt
gttgaccgccagctggagctgcagtactatcagaggaaatactcccatgcaggtgtctcg
gagaggaaggatggggaactggaggaaatgacctcggccgagagtcacgtctcccatggc
aatggtgtggaaccggacacaacttgcctctctatggctgagattgcctcctgtagctac
gaggccaggcaggcaggagtgaggaatgggatgttttttggccaggctaaacagctgtgt
ccttccctgcagtctgtcccttatgacttccaggcttacaaggaggtggcactggctatg
tacgagaccctcgccagttatactcacaacattgaggctctgagttgtgacgaggcgttg
gtggattgctctgccctgctggctgagttgggtgctacacctgaagagctggccagcgcc
atccggacagatgtcagggagaggactgggtgcactgcctcggtgggcatggggtccaac
atcctgctggcgaggatggcgacccggaaggccaagccggacggacagtacctcctgagg
tcagaggaagtggacgacttcatcagggaccacagggtcactagcctgccaggtgtgggc
cgttctatgggcgcaaagctggcgtctctgggtgtgaggtcgtgtggggacctgcagcag
gtgtctctacagcaactgcagaaggagtttggccctcgcaccgggcagaccctcttcagg
ttctgccgaggtctcgacgaccggcccgtacgcagcgagaaggaaaggaagtctgtctcg
gccgagatgaactacaacatccgcttcacacaggtggacgaggcggagtcgttcctgacc
aacctgtccatggaggtacagaagcgtcttcagggcgcggggctcaggggtcgcagactg
accctaaaggtcatggtgcgtaaggtgggggccccggtggagccatccaaatatgggggt
cacggcatctgtgacaatctggccaggtcagtgaccctggcccagtcgacagacagtggt
cagctgatagccagtgaggtcatcaagctgttccactcaatgaggctggaggtgcaggac
ctgaggggggtgggccttcaggtgcagctccttgatggggctcactcagccccctatgac
ccctctggccctaaaacacgctccatcagagacatgcttctggcccagcggccccccgcc
caacacaaccacacagattcgctagctgatgctcctgttgctgactcaaccaccaatcag
gggaagagttcctctgccagagtcccaccccccttctccactctctgccctccttcgcct
gctgatccaatcccagggacaagtaaagaagagccgctgccctctacacgcacacctaac
catgttcggacacgcctcaacctcagcatcgaggtcccctctccttcacaggtggacagg
tcagtgttggacgccttgcctgcagaattgagagaacaggtggagcgctcctggacccac
agagagaaagagagatcccacaacgggtcacaccaccgcccctctagccctcacccctca
tcccttctttcttccccctcctctcctcctacccccgctgcccttcctgtaggaacactg
gtgcttcagatccccaaccagcctggacagcctggctccacgggcatcatactggaactg
cctgacttttcccaggttgacccggaggtgtttgcagcgctccccagagagctccaggag
gaactgcgttcagcgtacagccgcagagagaccgcccaggcccaagggatcatcatggca
gagcagcggaaccccctgttgcagctgaagcaggttggagtgggtcgggtgaagaggcgc
tacaagaagaagaacacaaactccagccccattaagaaaggcccctcccctctaaagagg
ccccacccaccaggaaacagccctgccaaagccctacagcacccgctcagaccgagggac
ctatccaacggcctcaagctggagaatggaccttccacatcctccctaaagcaggatgtc
ccagagactctgtctaagttcacccctcgccctgaacccaccctggctggagcctgtgat
ttcacggacatccgaacactactcagagaatgggtcactaccatatcagaacccatggag
gaggacattctgcaggtggtcaagtactgcactgatctgatcgaggacaaagacctggag
aaacttgacctggtcatcaagtacatgaagaggttgatgcagcagtctgtggagtctgtg
tggagcatggcctttgacttcatcctggacaacgtgcaggttgacacagaattgcaatgg
tgtgaagtggcttcctctccttcaactacactgatgagaaaatctaggagaaggcaatac
tatatcgctttggatagctactatgtgacgtgcagatgcagagtggatgacatggtggtt
ttgaaatggtttctactgtacctgatccatgatcatataacgggaagggccagaaggaat
tatctcattggtcagtgtacctgtctatcacgactgacccgtgcctga

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