Oncorhynchus nerka (sockeye salmon): 115119741
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Entry
115119741 CDS
T07952
Name
(RefSeq) very low-density lipoprotein receptor-like isoform X1
KO
K20053
very low-density lipoprotein receptor
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115119741
Membrane trafficking [BR:
one04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
115119741
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
EGF_CA
cEGF
SGL
Motif
Other DBs
NCBI-GeneID:
115119741
NCBI-ProteinID:
XP_029504463
LinkDB
All DBs
Position
Unknown
AA seq
842 aa
AA seq
DB search
MLTSILEILILRICLEQCGFVHGSKTECEPSQFQCGNGRCIPSVWQCDGDEDCSDGSDEN
TCVRKTCAEVDFVCRNGQCVPKRWHCDGEPDCEDGSDERVEVCHTRTCRVNEFSCGAGST
QCIPVFWKCDGEKDCDNGEDEMSCGNITCASLEFTCASGRCISLNFVCNGEDDCGDGSDE
QECAPSSCGPSEFQCGNATCIPGNWVCDDDVDCQDQSDESPQRCGRQPTPPAKCSSSETQ
CGSGECIHRKWRCDGDPDCKDGSDEANCSVRTCRPDQFKCEDGNCIHGSRQCNGLRDCAD
GTDEVNCKNLTQCNGPDKFKCRSGECIEMSKVCNKARDCPDWSDEPINECNLNECLLNNG
GCSHICRDMVIGFECDCTPGLQLIDRKTCGDINECMNPGICSQICINLKGGYKCECHNRY
QMDPTTGVCKAVGKEPCLIFTNRRDIRKLGLERREYTQIVEQLRNTVALDADFTQQRIFW
ADLSQRAIFSTVLDKRGDVGSHVKVIDNVTPVGIAVDWIYNNIYWSDLGTKTIEVANFNG
TKRKVLFSSGLKEPASIAVDPLSGFLYWSDWGEPAKIEKSGMNGVDRQVLVQTDIQWPNG
ITLDLIKSRLYWVDSKLHMLCSVDLNGDNRRKVLQSPDYLAHPFALTVFEDRVFWTDGEN
EAIYGANKFTGSDVITLASNLNEPQDIIVYHELIQLSGTNWCNEKGLNGGCAYMCLPAPQ
INKYSPKYTCACPQDQTLASDALHCRPEANSSTSIHEANFTARGSTAAWAILPVLLLAMA
AAGGYLMWRNWQLKNKKSMNFDNPVYLKTTEEDLNMDISRHTSNIGHTYPAISVVNTEDD
LS
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atgttgacgtctattctggagattcttatcctacggatatgtcttgaacagtgcggtttt
gtacacggatcaaagacagaatgtgagcccagtcagttccagtgtgggaacggtcgctgc
atcccgtctgtctggcagtgtgacggggatgaggactgctcggacgggagtgacgagaac
acctgcgttcggaagacctgtgcagaggtggactttgtctgtcgtaatggccaatgcgtc
cccaagagatggcactgcgacggagagccagactgtgaggatgggtctgacgagcgtgtg
gaagtgtgccacaccaggacctgccgtgtgaatgagtttagctgtggggccgggtccacc
caatgcatccccgtcttctggaagtgtgatggagagaaggactgcgataacggagaggat
gaaatgagctgtggtaacatcacgtgcgcctcgctggagttcacctgtgcaagcggccgc
tgcatctccctcaacttcgtctgtaacggggaggatgactgtggtgacgggagtgatgag
caggaatgtgctccgtcctcctgtggtcccagcgagtttcagtgtggcaatgccacctgt
atccctggcaactgggtctgtgacgatgacgtggactgccaggaccaatcggatgagtcc
cctcagcgatgtggtcgccaacccacgccgccggccaaatgttcatccagcgagacacag
tgtgggtctggggagtgcatccaccgcaagtggcgatgtgacggggacccagactgcaag
gatggcagcgatgaagccaactgttctgttcgtacctgcagaccggaccagttcaagtgt
gaggacggcaactgtatccacggcagcagacaatgcaacggtttgcgtgattgtgcagat
ggcaccgatgaagtcaactgcaaaaacttgacacagtgcaatggccctgacaaattcaag
tgtcggagtggagagtgtatagagatgagtaaagtgtgcaacaaggcccgggactgtcca
gactggagcgacgagcccatcaatgagtgcaacctgaatgagtgtctgctgaacaatgga
ggctgctcccacatctgcagggacatggtgattggcttcgagtgtgactgcacccctgga
ctgcagctcatagaccgcaagacctgtggcgacatcaatgaatgtatgaaccctgggatc
tgtagtcagatttgtatcaacctgaagggaggttataagtgcgagtgccacaaccgctac
cagatggaccccaccacaggagtgtgcaaggctgtgggcaaggaaccctgtctgatcttc
actaaccgccgggacatccggaagctgggtctggagcggagggagtacacccagattgtg
gaacagctgcggaacacagtggcactggatgcagacttcactcagcagaggatcttctgg
gcagacctgagccagagggccatctttagcacggtgttggataagagaggagatgtagga
agtcatgtgaaggtgattgataatgtgacacctgtggggatcgctgtggactggatctat
aataacatctactggtcagacctcggcaccaagaccattgaagtggccaacttcaacggc
accaagcggaaggttctcttcagcagtggtttgaaagagcctgcgtccatcgctgtagat
ccactttctggattcctctattggtcagactggggtgaaccagcgaagattgagaagtct
ggtatgaacggggttgacaggcaggtcctggtccagactgatattcagtggcccaatgga
atcactctagacctgatcaagagcagactgtactgggtggactccaagctgcacatgctc
tgtagcgtggacctgaacggcgacaaccgtaggaaagtgctgcagtccccagactacctg
gctcacccctttgcgctcactgtgttcgaggatcgagtattctggacagatggggaaaac
gaggcgatctacggagcaaacaagttcacaggctctgatgtgattaccctggcaagcaat
ctgaacgagccgcaggacatcattgtttaccatgagctaatccagctgtccggaacaaac
tggtgcaatgagaagggtctgaacggaggctgtgcctacatgtgcctgccagcgccacag
atcaacaaatactcccccaagtacacatgtgcgtgtccccaagaccagacgctagcctca
gacgcccttcactgcagaccagaagccaacagcagtacatccatccatgaggcgaacttc
acagctagaggatctacagctgcctgggctatcctccctgtgttgttgctggccatggct
gcagcaggaggctacttgatgtggcgtaactggcagctgaagaataagaagagcatgaac
ttcgacaatccagtgtacctaaaaaccacagaagaggacctcaacatggatatcagcagg
cacacctccaatataggccacacatacccagcaatatcagtggtgaatacagaagatgac
ttgtcataa
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