Oncorhynchus nerka (sockeye salmon): 115119781
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Entry
115119781 CDS
T07952
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C-like
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04020
Calcium signaling pathway
one04080
Neuroactive ligand-receptor interaction
one04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
115119781
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
115119781
04082 Neuroactive ligand signaling
115119781
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
one04040
]
115119781
Ion channels [BR:
one04040
]
Ligand-gated channels
Glutamate (ionotropic)
115119781
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
NMDAR2_C
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
115119781
NCBI-ProteinID:
XP_029504513
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All DBs
Position
Unknown
AA seq
1252 aa
AA seq
DB search
MFKVMEEYNWDSFVVITSLYPGYEVYVDYVKTFTDTSYFMWELQDVLTFDMSADGMNDIR
ARRLLQQIDAQVLLVYCSHEEAQYLFSMAGEAGLLGPGYIWILPSLAVGNPDMPPPNSFP
VGLISIITDRWRMSLRKRVRDGVAIVVKGVQSFHKQRGFIPEGHNDCHSPVRASSNDTLF
RHMLNVTWEHNDFSFNPEGYLINPAMVIITLDRERQWDKVGNYEMGILQMRYPVWPRYGT
YLEPVSDNRHLTVATLEERPFVIVEAVDPMTGTCVSNTVPCRRQSNKTETIVGHTEPYTK
LCCKGFCIDILKKLSRTTKFSYDLYLVTNGKHGKLVRGSWNGMIGEVVYKRADMAIGSLT
INEERSEIIDFSVPFVETGISVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAVTV
FIFEYCSPVGYNRSLVSAKDPGGPTFTIGKSVWLLWGIVFNNSVPIENPKGTTSKVMVLV
WAFFAVIFLASYTANLAAFMIQEQYTDTVSGLSDKKFQKPQEQYPPFRFGTVPNGSTERN
IRSNYPEMHAHMVKYNQKGVEDALNSLKSGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSG
KVFATTGYGIALQKESRWKRPIDLALLQFLADGDTQKLQTVWLTGICRNEKKEVMSSKLD
IDNMAGVFYMLLVAMGLSLLVFSWEHLLYWKLRHSVRKSERLDFLLAISRGIYSCFNGVE
DSDRNGNLQNPDVTTNYTQANMLKMLQTAKDIVTSTRVENSLDNATKTIENWSRRGADNV
RVGLPPRVATTIDMSHSRLPYIASITDNHSPYPQRALASTFPIHYSDSATQPLLDKSRVV
TRPTPLRYTLPARGSHHFYERTLPISSLSSPHIAMRDPAPPSTSSHNPHPHHSSRLYVET
QPRHPTSPFVPYREFQVPDIYVEHHKGPLGRKFSYPPDHMGRKKRSHSYVFSEAQDTRGR
NDYDEPTSCLAELRANHLLNNHAPSASTMACMGGHYPSGSASCNSCMKPYLEPEMEDVPL
LGKDKVNRRASFLKATWSSDRIRQLGEKPSTSTMPDLFPRVVVANPKPHKLYGSQGNNLC
YPLAAEPAYLDPAHMRSYPYKQHKLKCSQSTRLPSYREAILQNAAALRRSSSTVVHRHYS
TYLNSYTDLPVYVGPLPQGPGQFYDKDMCHLFPCASHCPNNNALVPRMGDRQVVYQNNMF
GGYEGAVGRSREEPPLPGSGSRDRREVLVARRVNSPYVPKTWGRVSSLESEV
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaggtgatggaggagtacaactgggacagcttcgtggtcatcaccagcctgtac
ccgggctacgaggtctacgtggactatgtcaagaccttcactgacaccagctacttcatg
tgggaactgcaggatgtgctgaccttcgacatgtctgccgacggcatgaacgacatccgg
gcacggcgcctgctgcagcagatcgacgcccaggtactgctggtatactgctcccacgag
gaggcccagtaccttttcagtatggccggagaggccggcctgctggggcctggctacatc
tggatcctccctagccttgccgtggggaacccagacatgcccccaccaaacagcttccct
gtgggcctcattagcatcatcaccgaccgctggcggatgagcctgaggaagagggtgcgg
gatggggtggccatcgtggtcaaaggggtgcagagcttccacaaacagaggggcttcatc
cccgagggccacaacgactgccacagccctgttagggcatcttctaatgatacattgttc
aggcacatgttaaacgtaacatgggaacacaacgacttctcgttcaaccctgaagggtat
ctgatcaacccagctatggtcatcatcaccttagatcgagagagacagtgggataaggtg
gggaactatgagatggggatcctgcagatgagatacccggtgtggcctcgctacggcacc
tatctggagcccgtatcagataacagacacttgactgtggccacactggaggaacgtccc
tttgtcatagtggaggctgtcgaccccatgactgggacctgtgtcagcaacactgtgccc
tgccgccgccagtccaacaagacagagactattgtaggtcatactgagccctacaccaaa
ctgtgctgtaagggtttctgcatagacatcctgaagaagctgtcccgcaccaccaaattc
tcatacgacctctacctggtcaccaacgggaagcacggcaagctggtcagaggcagttgg
aacggcatgatcggagaggtggtatacaagcgggcggacatggccattggctcgctgacc
ataaacgaagagcgctcagaaattatcgacttctccgtgccgtttgtggagacggggatc
agtgtgatggttgccaggagcaatgggaccgtctcaccctctgcctttcttgagccctac
agtccggcggtgtgggtgatgatgtttgtgatgtgcttaacggtggtagctgtcacagtg
tttatctttgagtactgcagccctgtggggtacaaccggagtctggtgagcgccaaggat
cccggaggccccaccttcactattgggaagtctgtgtggctgctgtggggcatcgtcttc
aacaactctgttccaattgagaaccccaagggcaccaccagcaaggtcatggtcctggta
tgggccttcttcgctgtcatcttcctggcctcctacactgccaacctggcagccttcatg
atccaggagcaatacactgacacagtctctggactgagtgacaaaaagttccagaagcca
caggagcagtatccaccgtttcgtttcggtacggtcccaaatggaagcacagagaggaac
atccggagcaactaccctgagatgcatgcccacatggtcaaatacaaccagaagggtgtg
gaggacgccctcaacagcctcaaatcagggaaactggatgccttcatctatgacgctgct
gtgctgaactacatggcaggtaaagacgagggctgtaagctggtgaccatcggcagtggg
aaggtctttgccaccactggctacggcatcgccttgcagaaggagtcccgatggaaacgt
cctatagacctggccctgctccagttcctagcggatggtgacacacagaagctgcagaca
gtgtggctcacagggatctgtcgtaacgagaagaaggaggtgatgagcagtaagctggac
atagacaacatggcgggcgtcttctacatgctgctggtggccatggggctcagtctcctg
gtgttcagctgggaacatctgctctactggaagctgagacactcagtacgcaagtctgaa
cgcctcgacttcctgctcgccatcagcaggggaatctacagctgcttcaacggtgtggag
gactctgaccgcaacggaaacctgcagaaccctgacgtcaccaccaactacacccaggcc
aacatgctgaagatgctgcagacagccaaggacatcgtgacctcgaccagagtggagaac
tccctggacaatgccaccaagaccatagagaactggagccggcgaggagccgacaatgtg
cgggttggcctgccgcctcgggtggcaaccactatagacatgagccacagccgcctgccc
tacatcgccagcatcacggacaaccactcgccctacccccagagggcgctcgcttccaca
ttcccaatccactactcggacagcgccacccagcccctgctggacaaatccagggtggtg
acgcggcctaccccgctccgctacacccttccggcccgtggcagccaccacttctatgag
aggaccctacccatctccagccttagcagcccccacatcgccatgagggaccctgctccc
cctagcacctccagtcacaacccacacccccaccacagcagcaggctgtatgttgagacc
cagccccggcaccccacctccccgtttgtcccttacagagagttccaggtgcctgacatc
tatgtggaacaccacaaggggcccctgggacggaagttcagctacccccctgaccacatg
ggcaggaagaagaggtcccacagctacgtgttttccgaggcccaagacaccagggggagg
aacgactatgatgagccaacctcctgtctggctgagctgagggccaaccacctcctgaac
aaccacgccccttctgcatcaaccatggcctgcatggggggccactaccccagcggcagc
gccagctgcaactcctgcatgaagccctacctggagcctgaaatggaggatgtgcccttg
ctggggaaggacaaggtcaaccgccgggcctcttttctcaaggccacctggagcagtgac
aggatccgccagctgggcgagaagccctccacctccactatgcctgacctgttcccccgc
gtagtggtggccaaccccaagccccacaagctgtatggcagccaggggaacaacctgtgc
taccccctggccgctgagcctgcttacctagacccggctcatatgcgttcctacccctac
aagcagcataagctcaagtgctcccagtccacccggctaccatcctacagggaggctatc
ctgcagaacgcagccgccttgcggcgctcttcctccactgtggtgcacagacactactcc
acctacctgaactcctacacagacctgcctgtatacgtggggccactgccccaggggccc
gggcagttctacgacaaggacatgtgccacttgttcccctgtgcaagccactgccctaac
aacaatgccctggtgccccgtatgggggaccggcaggtggtgtaccagaacaatatgttt
gggggctacgagggcgcggtgggacggtcgcgggaggagccccccctgcccgggtctggg
agcagggatcggagggaggtcctggtggccagaagagtcaacagtccctatgtgccaaag
acctggggcagggtatccagtctggagtctgaggtctga
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