Oncorhynchus nerka (sockeye salmon): 115119811
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Entry
115119811 CDS
T07952
Symbol
uvssa
Name
(RefSeq) UV-stimulated scaffold protein A isoform X1
KO
K23720
UV-stimulated scaffold protein A
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
115119811 (uvssa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
one03400
]
115119811 (uvssa)
DNA repair and recombination proteins [BR:
one03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
115119811 (uvssa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
INTS1_R4
DUF1195
LBD_receptor
Motif
Other DBs
NCBI-GeneID:
115119811
NCBI-ProteinID:
XP_029504552
LinkDB
All DBs
Position
Unknown
AA seq
733 aa
AA seq
DB search
MDHAQRDKLSELVEELTTSGEPQLNPNKLKEVKKICKVSNDYIEHFYHLTMTQLAQEHAE
IRLSAFQMVSELFTRSHHFRVLLVDNFQEFLDLTVETDSDEPLPPPKEVARKLKTIAIKT
VQEWQATYGEAYKKLALGYHFLKQVKKVDFHDVQARTLAERKREEERQKRLGRIYKDKVE
KATKEMEDASGEIEECLTEINNCIKLLLPAEFDLSDLDTSTPANNSTVSVSSVPNEKAST
SSDLDEQPCCSKDLELQREPKNPETSTATKTNEEKEEEDPSDEDSDIEDVLVEDAFIRNT
GLISHKYNLDLNLSTDLKLKETEENEAVVNTMKDLHKLLSTKHLPVVQYWVQVFTKAGVP
EPLLRRAIDLKSSLERALQKHEDLHIDYKARHRRVMKAPEGSDDDDDDFEEVPEKEGFEP
HIPDHLREEYGLEPSPSTSVACKKPVQPPVKCPATGASHTLSRPRKRATDEEQDPTCAAA
TLRLFKQRLLPQPPSTSSAAGGHVDPTYQASEDRDKAPVIPFGLDLYYWGEEQPTAGKII
KNSSQHQFWVPNEVEEEVENKELAAQMKSRYITFAGRFQPVKHRCKTPMPNGGLCERQDR
VKCPFHGPIIPRDELGKPTNPEDAVRLEKEEWKRREDQPDWRDPELMRDIELATGEDLGS
SKSFGKGKKGKGKGKKKKYPNLSDLKKGVNTSRSRLEKKVFNPSSMRRVTDVMNKMDKLK
HAKFANQFNYALN
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atggaccacgcacaacgagataagttgtcagagctcgtggaagagttgaccacatctggg
gaaccacaactaaatccaaataaactgaaggaagtgaaaaagatatgcaaagtttccaac
gactacattgaacacttctaccaccttaccatgacgcagctggcccaggagcatgccgag
atccgcctgtcagccttccagatggtcagtgaactcttcacccgctcacaccacttcagg
gtcctgctggtggacaacttccaggagtttctggacctgacagtggagacggactcagat
gagcctcttccaccacccaaagaggtggcccgaaagctgaagaccattgccatcaaaact
gtgcaagaatggcaggccacttatggagaagcctataagaaactggccttgggctaccac
tttctcaagcaggttaaaaaggtggactttcatgatgttcaggccagaacactagctgag
aggaaacgagaggaggagagacagaaaagactggggaggatttataaagacaaagttgaa
aaggccaccaaggaaatggaagatgcctcaggagagattgaagagtgtcttacagagata
aacaactgcataaagttgcttctgcctgcagagtttgacctcagtgacctagatacctca
actccagccaataattcaaccgtttctgtctcttctgtgcctaatgagaaggctagcacc
tccagtgacctagacgaacagccctgttgtagtaaagacctggagctccagagggaaccc
aagaatccagagacaagtacagcaacgaaaaccaatgaggagaaggaggaagaggatcct
agtgatgaagacagcgatatagaggatgttctggtagaagatgcattcatacgcaacaca
ggactcatatctcacaaatacaacctggacctgaacctctccacagatttaaagctaaag
gagacagaggaaaatgaagcagtggtgaacaccatgaaggacctgcacaaactgctcagc
actaaacacctgcctgttgtccagtactgggttcaggttttcaccaaggcgggtgtgcca
gaaccgctcctcagacgtgccatagacttgaagtcgtcgctggagagagctctgcagaaa
catgaagacctgcacattgactacaaggccaggcatcgcagagtgatgaaagcgccggag
ggcagcgatgacgacgatgatgactttgaggaggttccggagaaggagggttttgaaccc
cacattccagaccatctacgggaggagtacggtttagagccgtccccctctacctctgtg
gcctgtaagaagccggtgcagcctccagtgaagtgtcctgcaacaggagcctctcacacc
ctctccagacccaggaagagagccactgacgaggagcaggaccccacctgtgcagccgcc
acactccgcctcttcaagcagcgcctcctaccccagccacctagcaccagctctgcagca
ggaggtcatgtggaccccacataccaggctagtgaggacagggacaaagctccagtcatc
cccttcggtttggacctctactactggggagaggagcaacccactgcaggcaaaatcatc
aagaatagctcccagcaccagttctgggttcccaacgaggtagaggaagaggtggagaat
aaggagctggctgcccagatgaagtccaggtacatcacgttcgctggccgcttccagccc
gtcaagcacaggtgcaaaacccccatgcccaacggaggcctctgtgaacgccaggaccga
gtcaagtgtcctttccatgggccgatcatcccacgagacgagctgggaaaacccaccaac
cctgaggacgctgtgcggctggagaaagaggaatggaaacgtagagaggaccagcctgac
tggcgggaccctgagctgatgagggacatagaacttgccactggggaggacctggggtcc
tccaaatcctttgggaagggcaagaaaggcaaggggaagggcaagaagaagaagtacccc
aacctcagtgatctgaagaagggtgttaacacttcacgctccagactagagaagaaggtt
ttcaacccgagctccatgaggcgagtgacagacgtcatgaataaaatggacaaattgaaa
cacgcaaagtttgcaaaccaatttaattatgcactgaattaa
DBGET
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