Oncorhynchus nerka (sockeye salmon): 115120038
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Entry
115120038 CDS
T07952
Symbol
aff3
Name
(RefSeq) LOW QUALITY PROTEIN: AF4/FMR2 family member 3
KO
K15195
AF4/FMR2 family member 3
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
one03021
]
115120038 (aff3)
Transcription machinery [BR:
one03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
115120038 (aff3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AFF4_CHD
AF4_int
Motif
Other DBs
NCBI-GeneID:
115120038
NCBI-ProteinID:
XP_029504824
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All DBs
Position
LG1:complement(21521496..21559400)
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AA seq
1246 aa
AA seq
DB search
MPTVLRDKGKLSNVSLLLRCAFQDMNNSWQSQQPSGGGQAQCFLYNPKDTKQHTTLHKQR
MYSQSKLGGMTHPHLAPHKSMLADDLKLSSDDDDADKGPEQSAPWVINNSLSEQHTHTHG
GRVRHSSSDSSGSDSYSELEEESSGQRSLSPSPETHSDPGTPTDTQALGCTKEIYHPSTT
QWQLDKWLKKVPKKSSSCDQDPSNHDHAQRATEDQSLSPDPHRAPSPSRPWGIREDYSPS
QSPVPSPRFNYSPRHSPRPSPGYSPCPSPSPCSSPCPSPTLRHSPIPSPVLSVCPSPFPS
PRATCSLSSIPQHPPRSPSPSLTHSSPRRYPQVRSPHQESYRPPTWPSLTTSPSHRPKIR
PWTAPVPSTEPKSKPRHSPYPQPPPQHSSRPKSTQTQPVPTPKTTAKAAPALTTELSHRH
KHRPRPSPNSSPKLHSQPSLKHARTLDPKSQHLSTSGQRPKESSRHSHNSNSNPRPSNGP
SLTTRLSTSLSPTPRAKTLPTTDPSRETSSRVGHCSKSSPKPHSLPNSIASSEPRAKFSP
SPRPKVKSWAPAPHSKLPQRKPQSREREQEVDNRRETHAPKRKVDRQTEGKGEHEVERQT
EKQGERQGKKQKERKEERQGERRLAEEQLLRRPWVQSSEEEEDVEERKRRREEREKEKCK
RRWKEQQQQSGEWQAVQPKQRPHTNSERRHHPIDPQRHGTKKKRRRKSEEEEERQSQPDP
SPPPSPSSPTPVVPPTDSSASSESDSEPDLPPNVTKVPADSTSSQRPIPRRGYQGPGRPA
DSRPRVLYPRRTTASNPGQGHQIQGKQKLYTLVPFGRRELAAASHRGLRNLVVQIDLSLL
NRVPDTTTGTPASHKHSSSSASSKHKEAMRHLCIPETERGDSKRKRKSENGVQHHRESKR
SNSQTNGPSAHTESTTHRRLDPHSDTRHNGFLEDYLDSTPLSDTLGPTKPPIKTQNPEPK
MEVECCVGVSGQSQPECEPWGPPLQRAGGQRGTVTNHEPPHHAEYYMHEAKRMKHRADAM
VDKLGKAVNYVDAALSFMECGKAMEEGPLEAKSPYTMYAETVELIRYAMKLKNHSGPGAR
QEDQQLAVLCFRCLALLYWQMFRLKKDHALKYSKALLDYFKSSPKVPTTPPIWSDSGKGT
GGPPSSLSPSPSALTLGSHTGSSPSSLISIPQRIHQMAANHLNITNSVLYSYEYWEVADS
LARDNKEFFNYLNTLSGPLTLHSSIAHAVQYTRQALQWIRISANVG
NT seq
3741 nt
NT seq
+upstream
nt +downstream
nt
atgcctacagtcctccgcgacaagggcaaactttccaacgtctctttgttgcttcgatgt
gctttccaggacatgaacaactcctggcagtcccagcaaccctcaggaggtggccaggcc
cagtgcttcctctacaaccctaaagacacaaagcagcacactactctgcacaaacaacgt
atgtattcacagtctaagctcggggggatgacccaccctcacctggcgcctcacaaatcc
atgctcgctgatgacttgaagctcagcagtgacgatgatgatgctgacaagggccctgaa
cagtcagccccctgggttattaacaacagtctgtcggagcagcacacacacacacatggt
gggagggtgagacattccagctcagactcttcaggctcagactcctacagtgaattggag
gaggagagcagtggccagcgctcccttagcccaagcccagaaacacactccgatcctggg
acacccaccgacactcaggcccttggctgcaccaaggagatatatcacccctccaccact
cagtggcagctggataagtggctgaaaaaagtccccaaaaaatcctcttcctgcgaccag
gatcccagcaatcacgaccacgcccagagagctacagaggaccagtcgctctccccagac
ccccacagagctccatctccatccagaccctgggggatcagagaggactacagccccagc
cagagccctgttcccagcccgcgctttaactacagccccaggcatagccctcggcctagc
cctggctacagcccctgccccagccccagcccctgttccagtccttgtcctagccccacc
ctaagacacagccccatccctagcccggtcctcagtgtctgtccaagccccttcccaagc
cccagagccacctgcagccttagttccattccccagcacccccctaggagtcctagtcct
agccttactcattctagcccccgccgctatcctcaggttcgaagtcctcatcaggaaagc
tacaggcctcccacgtggcctagcctaacaaccagcccgagccatagacccaaaatcagg
ccctggactgcacctgtacccagcactgagcccaagagcaagccaagacacagtccatat
cctcagcctccacctcagcacagctccaggcctaaatccacacagacccagcctgttccc
actcccaagaccacagccaaggcagcccctgcactgaccactgagctgagccacaggcac
aaacacagacccaggcctagtcctaactcgagtcccaagcttcattctcagcctagcttg
aaacacgcacgcactctagaccccaaaagccaacacctatcaacctctggacaaaggcct
aaggagagtagcagacacagccataattccaactccaaccccagacccagtaatgggcct
agtttgacaaccagactcagtaccagtctcagccccacacccagggccaagaccttaccc
accacagaccctagcagagagaccagcagcagggttggtcactgttccaaatccagccca
aagccacattctctgcctaactccatagctagttctgagcctcgcgctaaattcagcccc
agccctagacccaaagtcaagtcctgggcccctgctccccactcaaagcttccacagagg
aagccccaatccagggagagagaacaggaggtggacaaccggagagagacccatgcacca
aagaggaaggtagacaggcagacagagggaaagggggaacatgaggtagagagacagaca
gaaaaacaaggagagaggcaggggaagaaacagaaggaaagaaaggaggagagacaggga
gagagaagactggcggaggagcagttgcttagacgcccctgggtccagagctcagaggag
gaagaggacgtagaggagagaaagaggagaagggaggagagagagaaggagaagtgcaag
aggaggtggaaggagcagcagcagcagagtggtgaatggcaggccgtccagcccaagcag
agacctcacaccaacagcgagcgccgccaccatcccatcgacccacaacgccacgggacc
aagaaaaagaggaggaggaagagtgaggaggaggaagagagacagtctcagccggaccct
tcccctccaccatcaccctcctcccccactcctgttgtcccaccaacggactcctccgcc
tcttcagagtccgactcagagcccgatctgcctcccaacgtcaccaaagtcccggccgac
tccacatcaagccagcgtcccatccccaggagaggctaccagggcccggggaggcccgcg
gatagcaggcccagagtgctctaccccaggcgcaccaccgcatccaacccaggccagggg
caccaaatccagggaaagcagaaactctacaccctggtcccgtttggacgtcgtgagctg
gccgcagcctcccatcgaggcctgagaaacttggtggtgcagatagacctctccctgctc
aacagagtgcctgatactactacaggcaccccagcctctcacaaacactcttcctcctct
gcctcttccaagcataaagaagccatgagacacctgtgcatccccgagacagagagagga
gacagcaagaggaaacgcaagtcagagaatggagtccagcaccacagagagagtaagagg
agcaactcccagaccaacggcccctctgcccacacagagtctacaacgcatagacgtcta
gaccctcactcagacaccagacacaacgggttcttggaggactatctggacagtacccct
ctctctgacaccctcggccccaccaagccccccatcaaaacacagaacccagagcctaag
atggaggttgagtgttgtgttggggtgtcagggcagtctcagcccgagtgtgaaccatgg
ggacctcctttacaacgggcagggggacagagaggaaccgtaaccaaccatgaaccccca
catcatgctgagtactacatgcatgaagccaagaggatgaagcaccgtgcagatgccatg
gtggataagctggggaaggcagtgaactatgtggatgctgctctctccttcatggagtgt
ggaaaagctatggaggagggaccactggaggccaagtctccctataccatgtacgcagag
acagtagagcttatcaggtacgccatgaagctgaagaaccactctggcccaggggctaga
caggaagaccaacagttggccgtactgtgtttccggtgccttgctctcctatactggcag
atgtttcgtctaaagaaggatcacgccctgaagtattccaaggctctattggactacttt
aagagttctccaaaagtgcctactactcccccaatctggagcgactcgggaaagggcaca
gggggacctccctcgtccctctcccccagcccctcagccctcaccctgggctctcacact
ggcagctccccctcctccctcatcagcataccccaacgtatccaccagatggcagcaaac
cacctcaacatcaccaacagtgtcctctacagctatgagtactgggaggtagcagatagc
cttgccagagacaacaaggagttttttaactatttgaacaccctgtcggggccgttgact
ctccacagtagtattgctcatgcagtccagtacaccagacaggctctacagtggatacgc
atcagtgccaatgtgggttag
DBGET
integrated database retrieval system
