Oncorhynchus nerka (sockeye salmon): 115120253
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Entry
115120253 CDS
T07952
Name
(RefSeq) DDB1- and CUL4-associated factor 5-like
KO
K11800
DDB1- and CUL4-associated factor 5
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
one04121
]
115120253
Ubiquitin system [BR:
one04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
115120253
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
EIF3I
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR75_1st
Motif
Other DBs
NCBI-GeneID:
115120253
NCBI-ProteinID:
XP_029505019
LinkDB
All DBs
Position
Unknown
AA seq
741 aa
AA seq
DB search
MKEVKGCGMRSSVGFLSQRKLFGNPLMKEEFQRLRLAGCTSLYKKDMLGHFGCVNAIEFS
NNGGEYLVSEPFCLANYPSAFHSVMFNPAEPRLLATANSKEGVGLWDIRKPRTSLLRYGG
SMSLQSAMSVRFNSAGTQLLALRRRLNPPVLYELHSRLPSFQFDNQGYFNSCTMKSCCFA
GDEDQYILSGSDDFNLYMWRIPKDPEAGGPGRVVNGASMVLKGHRSIVNQVRFNPSTNMI
CSSGVEKVIKAWSPYQQTESLGDLDSLVEDKSRSLYSHEEYINLVLNSGSGLSHDYVSQS
IQEDPRMMAFFDSLVRREIEGWSSDSDSDLSEGAILQLHARGRRSTRAVGDGAGVLVGSG
VATPVPPSAAATADSDHSSSSSLAAPEASGAEHPEGVEPLQPRRRGSRYQQSVFLLDLVG
EDSDSSGFWPDPMPRPRSPSPRDNSTLSSPTSSPAGASSSSSSSTSSTSSEDEEQRRASR
RQRTAARWRRMHFPRLSSGGRPESAQALYPGGVDSCSYPKISIDEASSSSASSTELQQDQ
DSVQIGPHRSGSKTGRRTSHTLPGSSPAVSLDSQDDRAEQEGLLIASLLSQDALQQRNES
RAGRVGERRAALERMAEGLDSPEEADESDHSGWISPSSRHHSPGLNGLQHLDMTEVPVGC
RGRLAPDLFESSDSEGERETLELKSAGTRTLVEEEEEDGGSSSSQRGSSQGALKRTHLGS
RGQGSGEGSGGSETSEKKFKT
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaggtgaagggttgcggtatgcggtcctccgtgggctttctgtcccagagaaag
ctcttcggtaacccgctgatgaaggaagaatttcagagactccggttggcaggatgcacg
agcctttacaagaaagacatgctgggacatttcgggtgtgtaaacgccatagagttttcc
aacaatggaggagaataccttgtgtccgagcccttctgtctggccaactacccatcagcc
ttccacagtgtgatgttcaacccggcagagccccgactactggctacagccaactccaag
gagggggtggggctgtgggacatacgcaaacctcgcacttctctgctgcggtacggcggc
agcatgtccctgcagagtgccatgtcggtgcgttttaacagcgcagggacccagctcctg
gccctgcgtcgcaggcttaacccaccggtcctctacgagctacactctcgcctacccagc
ttccagttcgacaaccagggctacttcaactcctgtaccatgaagagctgctgcttcgct
ggagacgaggatcagtacatcttgtctggatcagatgacttcaacctttacatgtggaga
atccccaaggatcctgaagcaggaggcccgggacgtgtggtcaacggagcgtccatggtc
ctgaagggtcaccgttccatcgtgaaccaagtccggtttaaccccagcaccaatatgatc
tgctcctccggggtcgagaaggtcatcaaggcgtggagcccctaccagcagacggagagt
ctgggagacctggatagccttgtggaggataagtccaggagtctgtacagccacgaggag
tacatcaacttggtcctgaacagcggtagcggcctgagccacgactacgtctcacagtcc
atccaggaggatcctcgtatgatggccttctttgactctctggttcgtcgggagatcgag
ggctggagttcggactcagacagtgacctgagtgagggggccatcctgcagctccacgcc
aggggacggcgctccacgcgggctgtaggagacggcgccggggtcctggttgggagtgga
gtcgccacgcctgtaccgccctctgctgctgctactgccgactcagaccactcctcatcg
tcctcattagctgcccccgaggcctcgggggcggagcatcctgaaggggtggagccactg
cagccgaggaggcgtggcagcagatatcagcagtctgtgttcttattggacctggtggga
gaggactctgactccagtggattctggccagaccccatgccccggcctcgctctcccagc
ccccgagacaactccaccctctccagccccacctcctcccccgccggcgcctcctctagc
tcctcctcttccacctcctccaccagctctgaggacgaggagcagaggagagccagtagg
agacaacgtactgcagcccggtggcgccgcatgcacttcccccgcctgtccagtgggggg
cgccccgagtccgcccaggccttgtaccccgggggggtcgactcctgctcctaccccaag
atctcaatcgacgaggcctcatcctcctccgcgtcctccacggagcttcagcaggaccag
gactcggttcagatcggaccccacagaagtggctctaaaacggggagacgcacgtcgcac
accctccctggttctagccctgcggtgtctctggacagccaggacgaccgagcggagcag
gaggggctcctcatcgcctcccttctgtctcaagacgccctgcagcagaggaacgagtcc
cgggcaggaagggttggggagaggagggctgctttagagaggatggccgagggattagat
agtcctgaagaggccgacgagtccgatcatagtggctggatctcccctagttccagacac
cacagccctgggctgaacgggctgcagcaccttgacatgactgaggtgccggtaggctgt
aggggtcgcctggctccagacctatttgaatcctcagactccgagggagagagagagacc
ttagagttgaaatcagcaggcactaggaccctggtggaggaggaggaggaggatgggggg
tcgtcgtcgtctcagagaggctcatcccagggtgcgctgaaacggactcaccttgggtca
agaggtcaagggtcaggggaggggtcaggggggtcggagacctcagagaagaagttcaag
acatga
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