KEGG   Oncorhynchus nerka (sockeye salmon): 115120288
Entry
115120288         CDS       T07952                                 
Name
(RefSeq) transcription factor Sox-1a-like
  KO
K09267  transcription factor SOX1/3/14/21 (SOX group B)
Organism
one  Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:one00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:one03000]
    115120288
Transcription factors [BR:one03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG SOX
    115120288
SSDB
Motif
Pfam: SOXp HMG_box HMG_box_2 HMG_WDHD1
Other DBs
NCBI-GeneID: 115120288
NCBI-ProteinID: XP_029505095
LinkDB
Position
LG1:21718092..21722135
AA seq 301 aa
MNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRAMHMKE
HPDYKYRPRRKTKTLLKKDKYSLAGGLLSGAGGGGMGLGVGMGSSGVGQRLESTGGHGGS
ASSGYAHMNGWANGAYSGQMAAAAAAAAMMQEAQLAYSQHPGSGHHHHSHHHHHPHNPQP
MHRYDMSALQYSPISNSEGYMSASPSGYGGIPYTQHQSSGVSSSAAMGTLGSLVKSEPSV
SPPVSTHSRGPCPGDLREMISMYLPTGEPGDPSVQSRLHALPQHYQSATAGVNGTVPLTH
I
NT seq 906 nt   +upstreamnt  +downstreamnt
atgaacgcgttcatggtgtggtcccgcgggcagcggagaaagatggcccaggaaaacccc
aagatgcacaactctgagatcagcaagcggctgggagccgagtggaaggtcatgtccgag
gcggagaagagacccttcatcgacgaagcgaagcggttacgagcaatgcacatgaaggag
cacccggattacaagtacagaccgagacggaagaccaagacgctgctgaaaaaggacaaa
tactctctggccggtggcctgctctctggggccggcggcggtggaatgggtctgggtgtc
gggatgggttcatccggcgtcggccagaggttagagagcaccgggggccacgggggctcc
gccagctcaggctacgctcacatgaatggctgggcgaacggtgcgtactcggggcagatg
gctgcagctgctgcggcggcggcgatgatgcaagaggcgcagttagcttacagccagcac
ccgggcagcgggcatcaccaccactcacaccaccaccaccacccgcacaacccccagccc
atgcaccgctacgacatgtcggcactccagtacagccccatctcgaactctgagggctac
atgagcgcatctccgtccggctatggcgggatcccctacacgcagcaccagagctctggc
gtctcctcctcggctgccatgggcacgttagggtcgctggtgaagtcagagccgagcgta
agccctcccgttagcactcactccaggggcccttgccccggagacttgagagagatgata
agcatgtatttaccgaccggagagcccggggacccgtcggtgcaaagtagactccacgca
ttgccgcagcattaccagagtgcgacggctggggtgaacggaacggttccattaacgcat
atatag

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