Oncorhynchus nerka (sockeye salmon): 115120336
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Entry
115120336 CDS
T07952
Name
(RefSeq) iroquois-class homeodomain protein irx-1-like
KO
K24889
iroquois-class homeodomain protein IRX
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115120336
Transcription factors [BR:
one03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
115120336
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
115120336
NCBI-ProteinID:
XP_029505116
LinkDB
All DBs
Position
Unknown
AA seq
451 aa
AA seq
DB search
MSFSQLGYPQFLSGSQEVYGGDRAGSGRDGGAESGVNQAATAAAVSSMLGMYGNPWAAQN
YSAFLPYSGADLALISQMNSQYDLKDIPGVHPGGLAVHTGAGFYPYGQYGYGDPNRAKAA
TRETTSTLKAWLQEHQKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKVTWG
RSAEDRDGRIFSSDNEDEPEKQESEDEEDEEIDLESIDIDKVEENRGDQREGEGEGKLAS
DSSSLESQRKLSVEALRGMEGPISLIKAPVGACKNAVDLSPNGPGCQRPPQNKPKIWSLA
ETATSPDSSHKPSPAASAPHAATSPSHHPALLPGHGIYTCQIGKQLHNWANAAFLSANSL
LGVRSLLSTANPAGHHMPLHGALKRQDARATQASGASEDESGDESSESFSPKRDDDVNIR
RSGSPKSPFQLITDRSHHGTAQRALSTISTI
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgtctttctcgcagctggggtacccccagtttctaagtggctcccaggaggtttatggg
ggcgaccgggccggctctggccgagatggaggcgccgagagcggcgtgaatcaggcagct
actgccgctgctgttagctcgatgctggggatgtatggtaacccgtgggcggctcagaac
tacagcgcgtttctcccctacagcggtgcagacctcgccctcatatcgcaaatgaactcc
cagtatgatctgaaggacatccccggagttcacccgggaggtctggctgtccacaccggc
gcggggttctacccgtatggccagtatggctacggcgacccgaaccgagccaaggccgcc
accagggagaccaccagcactctgaaggcctggctgcaggagcaccagaagaacccgtat
cccaccaagggagagaagatcatgctggccatcatcaccaagatgacacttacacaggtg
tccacgtggttcgccaacgcgcgcaggcgtctgaagaaggagaacaaggtgacgtggggc
cgcagcgcggaggaccgggatggacggatcttcagtagtgacaatgaggacgagcctgag
aaacaggagagcgaggatgaagaggacgaggagatcgatttagagagtatcgacattgat
aaagtcgaggagaaccgtggagatcagagggaaggggagggagaggggaagctggcatcg
gattcgagtagcttggagagccagaggaagctgtctgttgaagccctcagaggcatggag
ggtcctatttctctcatcaaggcgccggttggtgcttgtaaaaacgcagtggatctttcc
cccaatggaccggggtgccagaggcccccacagaacaaacccaaaatctggtctctggcg
gagacagccacaagccccgacagttcccataaaccttccccggctgcctcagctcctcac
gcggccacgtctccctcccaccacccggccctactcccgggtcatggaatatacacttgc
cagatagggaagcagctccacaactgggccaacgcagcgttcctcagtgccaactctctt
ctgggcgtcaggtcgcttctcagcacggcaaacccagctggacaccacatgcctctccac
ggcgcactgaagcgtcaggacgcaagggcgacgcaggcttcaggggcatccgaggacgag
agtggagatgagtcttcggagagcttcagtccaaagcgagatgatgacgtgaatattcgc
aggtctggctcgccgaagtctcccttccagctgatcaccgacagatctcaccacggaacc
gcgcaacgcgctctctcgaccatttccacaatatga
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