Oncorhynchus nerka (sockeye salmon): 115120351
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Entry
115120351 CDS
T07952
Name
(RefSeq) non-muscle caldesmon-like isoform X1
KO
K12327
caldesmon
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
one00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
115120351
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
one04812
]
115120351
Cytoskeleton proteins [BR:
one04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
115120351
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caldesmon
Motif
Other DBs
NCBI-GeneID:
115120351
NCBI-ProteinID:
XP_029505140
LinkDB
All DBs
Position
Unknown
AA seq
593 aa
AA seq
DB search
MSHAILRRNSSKQGLQNLLKITTQRSVEDAEEVERERRRRARESFRSMGSSSTLGPGGPS
LDNGALTEDGLYERDLKPSSSSPSMEEDEGFSDWTQRLERRRQQAQRMEELSQATEEQDQ
RPLNGAAKPPTPYTLSGSATPTTSTSRQQRHKAEVEDEVEKKWGRKESERKGWEREEEVV
TEAREGEEEAEKQRQEQMRVLKKREEDQRSDAEEKVKEKRKEVKISYTSKVVLHTEAKHG
NVNGDTAGEKVTSYMVKTKLRAPRAVVQMAAAEAEEEAILETEAKLEKIRRSHAEKENQE
LEQLKHKQAEAEQELEELKRRREERRQVRKEEERRSREEEQQRLAKEEEEKRRMKEDIER
RRMEAAERMKSLSTSSVDGDEMFSSLSPKGSIYKITERTESLNRSLKKSNSFKKTQPPVL
LAKIDDRLEQYTTAIEYSQEVKATKQGLTDIPMSPEPVSSKKNLFEAGEAWNQSLAKGTP
PKDAESLKVGVADMITQWVKGNPDGTSRSSPSRPADVKAGDVMQKKNMWEIIGETSPGIS
GAVAKGNASGKKYKFVMTAHGKYEKIPVDDDDDDDENMDEYTNGKTDLYHGEY
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgtcacatgctatcctgagaagaaactccagcaagcaaggtttgcagaacctcttgaaa
ataaccacccagaggagcgtggaggatgcagaggaggtggagcgagagcgtcggcggagg
gcccgggagtccttccgcagtatgggcagcagcagtaccttgggccctggaggcccctca
ctggacaatggggccttgacggaggatggcctgtatgagagggatctgaagcccagcagc
agctctccctctatggaggaggacgagggcttcagtgactggacccagcggctggagaga
cgcaggcagcaggcccagcgcatggaggagctcagtcaggccacagaggagcaggaccag
aggcccctgaatggtgccgcaaagccccccacaccatataccctctctggctcagccacc
cccaccacatccacctctcgccagcagagacacaaggcagaagtggaggatgaagtggag
aagaagtggggaagaaaggaaagtgagaggaaagggtgggagcgagaggaggaggtggtt
acagaagcgagggaaggagaagaggaggcagagaaacagaggcaggagcagatgagagtg
ctgaagaagagagaggaggaccaaagatctgatgctgaggagaaggtgaaagagaagcgc
aaagaggtgaagatctcgtacacatccaaagtcgtcctccatacagaggcaaagcatggc
aacgtcaacggagacacagctggggagaaagtgacatcatacatggtcaaaaccaaatta
agggctcccagggctgtggtacaaatggcagctgcagaggctgaggaggaggccatcttg
gagacagaggccaagttggagaagatccgacggagccatgcggagaaggaaaaccaggag
cttgagcagctcaaacacaagcaggctgaggccgagcaggagctagaggagctgaagagg
aggagggaggagagacgccaggtcaggaaggaggaggagcgcaggagcagagaggaggag
caacagcgtctagccaaggaggaggaggagaagaggaggatgaaggaggacatagagagg
aggaggatggaggcagcagagcggatgaagagcctcagtacctccagcgtagacggagat
gagatgtttagctcgctcagtcccaaaggctccatctacaagatcacagagcgaacggaa
tccttgaaccgatccctaaagaaaagcaacagcttcaagaagacacagccccctgttctc
ctcgccaagatcgatgacaggctggagcaatacaccaccgccatcgagtactcccaggag
gtcaaggcaaccaaacagggcctgacggacatccccatgtcacctgagccagtgtcctcc
aagaagaacttgtttgaggctggagaggcctggaaccagagcctggccaaaggcacacca
cccaaggatgctgagagtctgaaggtgggcgtggcggacatgatcacccagtgggtgaag
gggaacccagatggcaccagcaggagctccccctcaagaccagctgatgtaaaagctggt
gacgtgatgcagaaaaagaacatgtgggagatcattggagaaacatccccagggatttca
ggagcagtggcaaagggcaatgcatctggtaaaaaatacaaatttgtgatgactgctcat
ggcaaatatgagaagattcctgttgatgatgatgatgatgatgatgaaaatatggatgaa
tacacgaatggaaaaacagacctataccatggtgaatattga
DBGET
integrated database retrieval system
