Oncorhynchus nerka (sockeye salmon): 115120365
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Entry
115120365 CDS
T07952
Symbol
neil1
Name
(RefSeq) endonuclease 8-like 1 isoform X1
KO
K10567
endonuclease VIII-like 1 [EC:3.2.2.-
4.2.99.18
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
115120365 (neil1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
one03400
]
115120365 (neil1)
Enzymes [BR:
one01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
115120365 (neil1)
DNA repair and recombination proteins [BR:
one03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
115120365 (neil1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neil1-DNA_bind
Fapy_DNA_glyco
H2TH
SurA_N_3
SurA_N_2
Motif
Other DBs
NCBI-GeneID:
115120365
NCBI-ProteinID:
XP_029505153
LinkDB
All DBs
Position
Unknown
AA seq
430 aa
AA seq
DB search
MPEGPELHLASLFVNRMCGGVVFTGPVQKSEVSKNPEVSFSCPAYTIIATSRGKEVRLTL
TPQKSDSAQGRCRRGKTGQVNQVQTMDIVFRFGMSGFFRFTTEAELPKHSHLRFYTNEKP
CRVLSFVDTRRFGTWQPNGTWQLNRGPCIMFEYLSYRENVLSHLSDRAFDRPICEVLLNQ
KYFNGIGNYLRAEILFRLNIPPFVKARTVLEGLQTHLSDEDRKSVVKVEDTEVKEEVTNT
EVKEEVTDREVKEEVTNTEVKEEVTNTEVKEEVTNTEVKEEVTNTEVKEEVTDREISDRA
AVKEDESETPDLLRLCHTVPLEVIKLGGKGYDPENMDYTDFKSWLQCYYVEGMKSVRDHN
GRTMWFKGDPGPMAPKDAKTKMKVKKEDDHDYKGGKKVKKARSESTTKPKYIQETVQEKE
VPQRRTGRRK
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagggtccagagttacacttggccagtctgtttgtcaacaggatgtgtggggga
gtggtcttcaccggcccagtacaaaaatcagaggtcagtaagaaccctgaggtctccttc
tcctgcccagcctacaccatcatcgccacctccagaggcaaggaggtccgcctcactcta
accccccagaagagtgactctgcccaggggagatgcaggcgggggaagacaggtcaggtc
aaccaggtccagaccatggacattgtcttccgtttcggaatgtctggattcttccgtttc
accacggaggcggagcttcctaaacattcccacctgcggttctacaccaatgagaagccc
tgtagggttctgagctttgtggacacacgccgctttggcacctggcaacccaacgggacc
tggcaactcaaccgagggccctgtatcatgtttgagtacctgagctacagggagaacgtc
ctttcccacctgtccgacagagcgttcgaccggcccatctgtgaggttctgttgaaccag
aagtactttaacggcattggcaactacctgagagctgagatcctctttagattaaacatc
cctccctttgtgaaggctcggacggttctggaaggacttcaaacacatctgtctgacgag
gaccggaagtccgttgttaaagtggaggacaccgaggtcaaagaggaggtcaccaacacc
gaggtcaaagaggaggtcaccgacagagaagtcaaagaggaggtcaccaacaccgaagtc
aaagaggaggtcaccaacaccgaggtcaaagaggaggtcaccaacaccgaggtcaaagag
gaggtcaccaacaccgaggtcaaagaggaggtcaccgacagagaaatctcagacagagct
gctgtgaaggaggatgagagtgagactccagacctgctccgtctctgtcacacagtacct
ctggaggtcatcaagttaggtggtaaaggttacgacccagagaacatggactacactgac
tttaaatcttggctccagtgttactatgtggaggggatgaagtctgtaagagatcacaac
ggcagaactatgtggttcaagggagatccaggtcccatggctcctaaagatgccaaaaca
aagatgaaggtgaagaaagaggatgaccatgattataaagggggaaaaaaggtaaagaag
gcccgctctgagagcacgacgaagccaaaatacatacaggaaacggtgcaggaaaaggaa
gttcctcagagacggacaggaaggaggaagtaa
DBGET
integrated database retrieval system
