KEGG   Oncorhynchus nerka (sockeye salmon): 115120398
Entry
115120398         CDS       T07952                                 
Name
(RefSeq) ubiquilin-1-like isoform X1
  KO
K04523  ubiquilin
Organism
one  Oncorhynchus nerka (sockeye salmon)
Pathway
one04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:one00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    115120398
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:one04131]
    115120398
   03051 Proteasome [BR:one03051]
    115120398
Membrane trafficking [BR:one04131]
 Autophagy
  Chaperone mediated autophagy (CMA)
   Selective cargos
    115120398
Proteasome [BR:one03051]
 Eukaryotic proteasome
  Proteasome interacting proteins (PIPs)
   UBL-UBA shuttle proteins
    115120398
SSDB
Motif
Pfam: UBQLN1 ubiquitin STI1-HOP_DP UBA Rad60-SLD UBA_7 Ubiquitin_5 YukD Dsc3_N CUE UBA_HOIP UCH_UBL1
Other DBs
NCBI-GeneID: 115120398
NCBI-ProteinID: XP_029505184
LinkDB
Position
Unknown
AA seq 562 aa
MANTVDEDEQQPFPAECKIITVTVKTPKEKEEIAIPENSSIKQFKEQIAQRFQAQTEQLV
LIFAGKILKDADLLSHQGIYNGLTIHLVIKTQSRPPELCTSPSNSTASEQAQPEGPTSVP
GPPPVEPTSVPRPSPASSATPTFSLGLGSPGTAAAGPGLAELQRQLMSNPELLAQIMDSP
LVQGMLSNPDMMRQLIMANPQMQLLLQHNPNITHLFNNPDVMRQTLEIARNPTMMQEMLR
NQDRALSNNALHRMSTDAQGPMLNAAAQEPIAGNPSASLTTSSPGEIQSPRVENGDPLAN
PWVPPASTDTPIGTATPTTTPTLSSNGPQTSLHNLGPAMGAAMFNSLGMQSLLQQITENP
TLMHNMLSAPYMRSLLNSLSQNPDLAAQMMLNNPLFSGNPQLQQQMRQQLPMFLQQMQNP
EMLSAMSNPRAMQALLQIQQGLQTLATEAPGFIPGVGLGGAGSDLNPAPGLSSDPAPSDL
SSGSQVVTETGQRQQQQFVRQMLDALASTNQQAQTEELLFQEQVEQLTTMGFLNPEANLQ
ALIATGGDVNAAVERLLDSPSL
NT seq 1689 nt   +upstreamnt  +downstreamnt
atggctaatactgtggatgaggacgagcaacaaccattccctgctgaatgtaagatcatc
acagttactgtgaaaacaccaaaggaaaaagaggaaatcgccattccagagaacagctcc
atcaaacagtttaaggagcagatagcccagcggttccaggcacaaacagagcagttggta
ctcatcttcgctgggaagatcctcaaagatgcagatctgctgagtcatcaaggcatctac
aacggactgaccatccacctggtcatcaagacccagagcaggcctccggagttgtgtacc
tctccttccaacagcactgcctcagaacaggcccaaccagaaggccctacctctgtccct
ggaccccctcctgtagaacctacctctgtccctcgaccctctcctgcttcttcagccacc
cctaccttcagccttggtctaggcagtccagggacagctgctgcggggcctggtctcgct
gagctgcagaggcagctgatgtccaaccctgagctgctggcccagattatggacagtccc
ttggtccagggcatgctgtccaacccagacatgatgagacagctcatcatggccaacccc
cagatgcagctgctgctgcagcacaaccccaacatcacccacctgttcaacaaccctgat
gtcatgagacagaccctggagatagcacggaacccgaccatgatgcaggagatgttgcgc
aaccaggacagggcactaagcaacaatgccctccacaggatgtccactgatgctcaggga
cccatgctgaatgctgctgctcaggaaccgattgcaggaaacccttctgcttctctgacg
acctcgtcaccaggggaaatccagtccccccgggtggaaaatggagaccccctcgccaac
ccctgggttccccctgcttccacagacacccctataggcaccgccacacccaccactacc
cccaccctgtccagcaatggccctcagaccagcctgcacaacctaggtcccgccatggga
gcagctatgttcaatagtctgggaatgcagagtcttctgcagcagatcacggagaacccc
acactgatgcacaacatgctgtcagccccctacatgaggagcctactcaacagcctgagc
cagaaccctgacctagcagcacagatgatgctgaacaacccactgttttctgggaaccct
caactgcagcagcaaatgagacaacaactcccaatgttcctccaacagatgcagaaccct
gagatgctgtcggccatgtccaaccccagggccatgcaggcactgctgcagatccaacag
ggactgcagacccttgccactgaggcacctggattcataccaggggttggactgggaggc
gccggctcagatcttaaccctgcccctggattgtcatcagaccccgcccctagtgatctc
agcagtgggtcccaggtagtcacggaaacgggtcagcggcaacaacaacagtttgtgcgt
cagatgctagacgctctcgctagcaccaatcagcaggctcagactgaagagctgctgttc
caggagcaggtggagcagctgacgaccatgggtttcctcaacccagaggccaacctgcag
gccctcatcgctaccgggggagacgtcaacgccgctgtagaacgactgctggactctcca
tccttgtaa

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