Oncorhynchus nerka (sockeye salmon): 115120411
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Entry
115120411 CDS
T07952
Name
(RefSeq) cadherin-related family member 1-like isoform X1
KO
K16501
cadherin-related family member 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
one04515
]
115120411
Cell adhesion molecules [BR:
one04515
]
Cadherins
Cadherin related
115120411
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
115120411
NCBI-ProteinID:
XP_029505205
LinkDB
All DBs
Position
Unknown
AA seq
895 aa
AA seq
DB search
MKNQKKKRGFIFLLVFLVSLPPSLGRQTSDYAPYFYDKGPSSTNGNMALFSISEDTPVGT
QVYILNGTDPEGDAVWFGLTFEKGTREYLRVDPKSGNITLIQELDREKQGEISALVSITD
GRNKVVETIRVFVTDANDEEPEFQNLPFAVDVPEDTPAGSSIYRVQAVDKDMGSGGSVTY
YLQGTPTTKFTIDGHSGVLRIKPGETLDFETTTLHFVTVVAKDGGGQYKGKHQVLTSTAT
ITINVLDAQDTPPAFVGTPYFGYVYEVSVPGSEIATVFAKDGDEGNPNPIHYSITNGSED
VFTINSTTGCISLTTYPVTLRNELYEIKVKATELGPSEELLDYNAMTMVTVRVVDLNNHP
PTFYGENGPQSQFEVTMYEHPPEGEILRGLKITVNDSDQGANAKFKLRLVGPGRVLRVVP
QTVLNEAQVTVIVEDSAAIDYEKGKSLTYKLLAVEIDTPERFSATADIVIHLLDTNDNTP
RFTSEYYMARIPENSPGGSNVVSVTANDPDSGLWGEVKYSIYGSGSDLFLIHPSSGIIYT
QAWATLDAEVKSKYNFYVKAEDTEGKYSLAEVFVTVLDMNDHVPEFDDSFVERTMIIGAP
VRVEAIDADAESPNNVIEYSIMQAEPDNIFDINAETGEIKLKSYIKSMEIVQNITKQKDC
RWSLVVQARDRGSPSFSTTAVVNIDITEATQLKGPMAAFLLQSRHNPMKALGMVAGVISI
LVGVTVLISTAMFLRNTKSNRIMPARRIIVRRRPSRDRKPWTFNVPFRGGGGGNDPLNKF
VVGDPEAGSVSINPNKNIRPRCSRSKHNTLPPRAPCLSPPSCPPLSSDPRPSERPRAAVP
TVSGALASKGSRRSSQSRESNISSETTRIPVSSALVSELKRRLEQKITESNSSYY
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaccaaaagaaaaagagagggtttatttttctcttagtcttcttggtttctctt
cctccctcgttgggaaggcaaacgtcagactatgctccctatttctacgacaaaggaccg
agcagcaccaatgggaatatggctctcttcagtatctcagaagacacaccagtcggaaca
caggtatatatcctaaatggcactgacccagagggggatgccgtgtggtttggcctgacc
tttgagaagggcaccagagaatacctgagagtggaccccaaatcaggaaacataactctc
attcaggaactagacagagagaaacaaggtgaaatctcagctctcgttagtataacagac
ggccggaataaggttgtcgagacgatacgggtgtttgtcaccgatgccaatgatgaagaa
ccagagttccagaacctgcctttcgccgtagacgtcccagaggacactccagctggaagc
agcatttacagagtgcaagcggtggataaagacatgggctctggaggcagtgtcacctac
tacttacagggaactcctactaccaagttcaccatcgatggccacagtggggtcctgcgg
atcaaaccaggcgagacgctcgactttgagacgacaacgttacactttgtgacggtggtt
gccaaggatggaggcgggcagtacaaagggaagcatcaggtgttgacatctacagccacc
ataaccatcaacgtcctcgacgcccaagacactcctccagccttcgttggaactccttac
tttggctacgtctacgaggtctcagttcctggttctgaaatagccactgtgtttgccaaa
gatggtgacgaaggaaaccctaatcctattcattactctattaccaatggtagtgaggat
gtcttcaccatcaatagcacaactggttgtatcagcctaacaacttatccagtcacgctg
aggaatgaattatatgaaatcaaagtcaaggccactgagctggggcctagcgaggagctg
ttggactacaatgccatgactatggtgacggttcgagtggtggatctcaacaaccaccct
cctaccttctacggagagaacgggccccagagccagttcgaggtgaccatgtatgagcac
cctccagagggggagatcctcagggggctgaagataacggtcaacgactctgatcagggg
gcgaatgctaaatttaaactgagattggtagggcctggtcgtgtactcagagtggtgccc
cagacggtcctaaatgaagcacaggtcaccgtcatcgttgaagactctgctgccattgac
tatgaaaaaggcaaatccttaacatacaagttactggctgtggagattgacacccctgag
aggttcagtgcgacagctgatattgtgattcaccttttggacaccaatgacaacactccc
aggttcacctcagagtattacatggcacgtatcccggagaactcccccggaggctccaac
gttgtgtctgtcaccgccaatgatccagactctggcctttggggtgaagtcaagtactcc
atctatggatccggatctgatttgtttctcatccacccgtcctcaggcatcatctacacc
caggcctgggccactctggatgctgaggtcaagtccaagtacaacttctacgtgaaggca
gaggacacagagggcaagtacagcctggcggaggtgtttgtcactgtcctggacatgaac
gaccacgttccagagtttgatgacagctttgtggagaggaccatgatcatcggtgcaccc
gttagggtagaggccatagatgccgatgcagagtcgcccaataacgtcattgagtattcc
attatgcaagctgagccggacaacatcttcgacatcaacgcagagactggagagatcaag
ctcaagtcgtacatcaagtccatggagatcgtgcagaacatcaccaagcagaaggactgc
aggtggtctctggtggtccaagcccgggaccgagggtctccatccttcagcactaccgcc
gtggtcaacatcgacatcactgaggcaactcaactcaaggggcctatggcagccttttta
ttgcaaagtaggcacaacccaatgaaggccctaggcatggtcgctggtgtcattagcata
ttggtaggggtcactgtcttgatctccacggctatgttcttgcgcaacacaaagtccaac
aggataatgccggcgcgtcgcatcatcgtcagacggagaccgtcaagagaccgtaagccg
tggacgtttaacgtaccgttccgtggcggtggcggtggaaatgacccattgaacaagttt
gttgtaggcgacccggaagcagggagtgtcagcatcaaccccaacaaaaacatcagaccc
cggtgctctagatcaaagcacaatactctgccccccagagccccctgtctgtctcctcca
tcctgtccccctctgtcctccgaccccaggcccagtgagaggccccgggctgcagtgccg
accgtctctggggccctggcttcaaagggctccaggagatccagccagagcagagagagc
aacatcagctctgagactactagaatccccgtcagctcagccctggtctctgaactcaaa
aggagactggagcagaaaatcactgagagcaactcaagctattattga
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