Oncorhynchus nerka (sockeye salmon): 115120516
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Entry
115120516 CDS
T07952
Name
(RefSeq) patched domain-containing protein 3-like
KO
K24682
patched domain-containing protein
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
one04990
]
115120516
Domain-containing proteins not elsewhere classified [BR:
one04990
]
Other domain-containing proteins
Patched domain-containing proteins
115120516
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
MMPL
ACR_tran
Motif
Other DBs
NCBI-GeneID:
115120516
NCBI-ProteinID:
XP_029505326
LinkDB
All DBs
Position
Unknown
AA seq
823 aa
AA seq
DB search
MLISACLGGGFYFLADREANGIEEMFTPMDGPAKNERQVVKEYFPQNDSDFSRLRLYTEG
TFASLIIVTPAANILTNPAFTKIIAMDREVKAIEVGTFNFSTLCVKKGDVCVSNSIFDIV
KTPNVTAIDYPYHDNIFIASEIGGVKLKTGSTEIESAKAIRLFYFLKEDNQTVNTMWLQK
FIETASTMQKEEGMTISYFTSISRDEEFEKSSDSIIPLFSLTYALAITFSIISCIRLDCV
RNKVWVATFGVLSAGMAVLSSFGLLLYCGMPFAMTVATAPFLILGIGVDDMFIMISCWQQ
TQVHDNVEDRMAATYKEAAVSITITTLTDALAFFIGLLTPFGSVQSFCMYTGTAVLFCYL
YNITFFGAFLALNGRREKSNRHWLTCMKVSEPEEDSEKYNICSVGGAYDHETGKEEPMPI
NNFFKTYYGPFLTNNWTKGFVILLYAVYLGSSIYGCLQIQEGIDLKNLAADSSYVGSYYD
NEDEFFSEYGPNVMVVVTDSAFKYWDESARNILDSCLQNFEGLPMVSQNRTISWLNEYLT
FGKMTHLNLSEENTFKSNLSAFLERSDFIQDVNFTDNTIYASRVFIQTVNVSTAVDEKNM
LNELRETASDCSVKLVVYHPAFIYFDQYAVIVSNTIQNIVVATLAMLVISLLLIPNPICS
LWVTFAIASVIVGVAGFMAFWDVNLDSVSMINLVICIGFSVDFSAHISYAFVSSDKRTAN
EKAIDAVYHLGYPIIQGAVSTILGVVALSAAESYIFRTFFKIMFLVILFGAVHGIVFIPV
FLSFFGICSAKVGDEEDAGDNPQDNTYQLKQKMNDNTVCENNF
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgttgatttctgcttgtcttggcggaggattttacttccttgcggacagagaagctaac
ggcattgaagagatgtttacacctatggacggaccagcgaaaaacgaacgacaagtagtg
aaagaatattttccacagaatgacagcgacttctcacgtttgcgtctctataccgaaggg
acctttgcatctctcataattgttacgcccgcagcaaatatcctcacaaatcctgctttt
acaaaaattattgctatggatagggaagtgaaagccattgaagtaggaacatttaatttc
tcaaccctttgtgttaagaaaggtgatgtgtgcgtgtcaaattcaatctttgatattgta
aaaactcccaatgttaccgctattgattacccataccatgacaacattttcatcgcatct
gaaattggtggtgtgaaactgaaaactggatcaactgaaattgaaagcgcaaaggcaatt
cgacttttttacttcttaaaagaagacaaccagactgtaaatacgatgtggctgcagaag
ttcatagagaccgcgtcgacgatgcaaaaagaagaaggcatgaccatatcgtattttaca
tcaatatcaagagatgaagagtttgagaagagctctgactcaatcattcctctcttctca
ttgacctatgccctggccatcaccttttcaatcatatcttgtataaggttggactgtgtt
aggaacaaggtgtgggtggcgacctttggtgtcctctcagctggtatggcggtgttgtcc
agttttgggttgttgctgtactgtgggatgcccttcgctatgactgtggcaacagctcca
ttcctgattctgggaattggtgttgacgacatgttcatcatgatttcttgttggcagcag
actcaagttcatgacaacgtagaggaccgtatggcagctacatacaaagaggcagctgtt
tctatcaccatcacaacactaactgatgccctggctttctttattggtctgttaactccc
tttggttctgtacagtccttttgtatgtatactggcacagctgtgctgttctgctacttg
tacaacatcaccttctttggtgcatttctggcactgaatggaagacgtgaaaagagcaac
agacattggctgacctgcatgaaggtttcagaaccagaggaggattctgaaaagtacaat
atctgctctgtagggggcgcttatgatcacgaaacaggaaaagaggaaccgatgccaatt
aacaacttctttaagacgtactatggtccatttctaacaaataattggaccaaggggttt
gtgatcctgctctatgctgtatatttgggctcaagcatctatggttgcttacaaatccaa
gagggcatagaccttaaaaatctagcagccgatagctcatatgtgggtagctattatgat
aatgaggacgaattcttttcagagtatggcccaaatgttatggttgttgtgacagacagt
gcgtttaaatattgggacgaaagtgctcggaatattcttgactcctgccttcaaaacttt
gaaggtctaccaatggtttctcaaaacaggaccatatcttggctcaatgaatatcttaca
tttggaaagatgacccatttgaatctaagtgaggaaaatacattcaaaagtaatttgtct
gcatttctcgagaggtctgatttcatacaagatgtgaattttacagacaacacaatatat
gcttcacgtgtgttcattcagacagtcaacgtcagtacagctgttgatgaaaagaacatg
ttgaacgagcttcgggagacagctagtgattgttcagtaaagttggttgtttaccatcct
gctttcatatactttgaccagtatgcagtcattgttagtaacaccatccaaaacattgta
gttgccactcttgccatgctggtgatctccctcctgttgattcccaaccccatatgttct
ctttgggtgacctttgccattgcctctgtcatagtgggcgttgctggtttcatggcgttt
tgggacgtcaatctcgactctgtatccatgatcaatcttgtcatctgcatcggtttctca
gtggacttttccgctcacatttcctatgccttcgtctctagcgataagagaactgcgaac
gagaaggctatagatgcggtctatcacttgggctatcctatcatacagggagctgtgtct
actatcttaggagtggtggctctgtctgctgctgagagctacatcttcagaaccttcttt
aagatcatgttcttggtcattttgtttggggccgtccatggtatagtgtttatccccgtg
tttttgtctttctttggaatctgcagtgctaaagttggcgatgaagaagatgcaggtgat
aaccctcaagataatacctatcaattgaaacagaaaatgaatgataatactgtttgtgaa
aacaatttctga
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