Oncorhynchus nerka (sockeye salmon): 115120544
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Entry
115120544 CDS
T07952
Name
(RefSeq) tubby-related protein 4-like isoform X1
KO
K24720
tubby-related protein 4
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
one04990
]
115120544
Domain-containing proteins not elsewhere classified [BR:
one04990
]
Other domain-containing proteins
Tubby family proteins
115120544
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR35_TULP_N
Tub
ANAPC4_WD40
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
WD40_CDC20-Fz
Beta-prop_EML_2
Ribosomal_60s
Motif
Other DBs
NCBI-GeneID:
115120544
NCBI-ProteinID:
XP_029505362
LinkDB
All DBs
Position
Unknown
AA seq
1934 aa
AA seq
DB search
MSRNCEPGHSVRMLAAVEHGPILCSDSNILCLSWKGRVPKSEKDKPVCQRRYYEEGWLAT
GNGRGVVGVTFTSSHCRRDRNTPQRINFNLRGHNSEVVLVRWNEPFQKLATCDMEGGIFV
WIQYEGRWSVELVNDRGAQVSDFTWSHDGSQALIAYRDGFVLVGSVSGQRHWSSEINLES
QITCGIWTPDDQQVLFGTADGQVIVMDCHGRMIAHVLLHESDGIVGMSWNCPCFLVEDST
ESDTDSDDNNPPQVRNLKPLLTVSFISGDISLMNNYDDLSPTVIRSGLKDVEVQWCSQGD
LLAVAGMERHGVPGLPSDSIMRNALVKFYNVQGEHIYTLETPAQRPITTICWGHRDSRLF
LACGPALYVVRVEHRVASLQLLCQQGIASALREERDVGKLNMPSLLCSYVTTAFIPTIKP
PIPDPNNIRDFVSYPTAGNERLHCTMKRAEDNPEAGGPCYTLYLEHLGGLVPILKGRRIS
KLRPEFIIMDPKTDSKAGGLGTGKDEVCVNAMISYMTDSCNCSDSSDIELSDEWVGKKSP
KLSRGNRSPKHSRRRRNMESRKSPKTSRTSQEGLRSPRLPTKKPLIRSPSLTRREMSMDG
ISEHNYLAQVTSNIWGTKFKIVGLASFLPANLGAVIYKTSLLHLQPRQMTIYLPEVRRIS
LDFMSLPVFNPNVFSEDEDDLPVTGPSGVTGDNPPCTVNIPIAPIHSPAQAMSPTQSIGL
VQSLLANQNIQLDVLTNPTATASAAAAAAAASASVLGSDHGQDAVAVHYSGTLGRYSNPG
QVIFNGLEIGPLLAGTLPPPPPPHNLPQQPHQQRPQSQQTHQQQQSKQPQQIQTQQQQQQ
QQQRMQHQQLQHQQPQIPQHQQLQHQQPQIPQQHQQLQQLHIQQIQQQQQQQTQQHQALQ
QQYQQQQAALQQQQQQIQQQHQHLQQQQIAQQHQQMQLQHEQMHQQQQQMQQQQQQIRQQ
IIEMRQQQQQLQQQHQQIQQQHQQMQRQHQQMQQQLKLQITLPPPPTGYPTISLQQFQVP
HPSPELGPERGQQGHTQSHTLGRPSLPRSRPPSFIDVDSIRSRPPSFLEADTSRSRPPSF
IDIDTIRTRPPSFIDVDTGTLRSRPPSFLDADSSRSRTLSFIDTDTLRSRPPSFLDAETS
LEIQMRKVNAPPPYPGTVVSAATATTSTAPQTLITNCDNPNILVTADPCLKKDEFSLHPV
GLQYQMGYERITTFDSSGNVEEVCRPRRRLIRNQNAYAVQGMGGSATLKVTSSSDSKKIH
LPYSSATLSRLSVPRYSIPSGDPPPYPDPANQVNINTTTLPPPQRMDSSHMIHATLRRDR
RDGESRLKVSQMVDASRTLPSKSKINSAALALSYQQRVPTALYTCTQCSSNSSSTSVSVS
GGGSSSSGIAGGTVVRQDFPPGKGAHHSTIIVHSKSTSPLASQSSYNLLSPIDNSRDRTV
YVNSAFTEDEALSQQCRHLTLGEVSLTLKRPPPYQWDPNTAEEFWIPQEQTILVPPPPPT
HKPPPPLIFSNAQHLDMTRLPFLLSTKPPSSPSTVSFPSGYQISLSPFPPGGGQGGPPLQ
SMQSPPPPCPPNEVVAPVPQFTQQDPNLVLPPGYPPNLANLACCPLPPMYPGASSCAGLQ
LQPVSLHPWNPYSLPMQDPSGSATLPSKSHQLLEKPVLSPSPPTVPPPPPPSLPPPPPPT
MLPKPKSPTEELTESASSFQEPSSLNESPVPDRQGTDRFSKKSRKRLDSRAEEANMTTVS
EGKSKKEGRALSDFNSLISSPRLGGREKKKPKGQREQLNKTKKLNRTSTTSEFQDSSESE
PELFISGDELMNQSQSSKKGWKSKRSLRMASELEEIKCRKANEREDRGLGSQGFVYVMAN
KQPLWNEATQVYQLDFGGRVTQESAKNFQIELDGRQVMQFGRIDGNAYILDFQYPFSAVQ
AFAVALANVTQRLK
NT seq
5805 nt
NT seq
+upstream
nt +downstream
nt
atgtccaggaactgtgagcctggtcactcagtaaggatgttagctgctgtagaacatggt
cccatcctctgcagcgactccaacatcctctgcctctcctggaagggccgggtccccaag
agcgagaaggacaagccggtgtgccagcggcgctactatgaggagggctggttggccaca
gggaacgggagaggggtggtgggcgtaacgttcacatccagccactgcaggagagacagg
aacacacctcagagaatcaacttcaacctgcgaggacacaacagtgaggttgtgttggtc
cgttggaatgagccctttcagaagctggccacgtgtgacatggagggaggcatctttgtt
tggattcaatatgagggacggtggtctgtggagttagtgaatgaccgcggtgcccaggtg
agtgacttcacatggtctcatgacggcagccaggccctgatcgcctaccgggatgggttt
gtcctggtgggctcggtcagcggacagagacactggtcctcagagattaacctggagagc
cagatcacctgtggcatctggacacctgatgaccaacaggtgttgtttggtacggctgat
ggtcaggtgatagtgatggactgccatggtcgtatgatcgcccacgtcctcctgcatgag
tcagatggcatcgtcggcatgtcctggaactgtccctgtttcctggtggaggacagcaca
gagagtgacaccgactctgatgacaataacccacctcaagtacgtaacctgaagcccctt
ctgacagtcagcttcatatcaggagacatcagtttgatgaacaactacgatgacctctct
cctaccgtcatccgctcaggactcaaagatgtagaggtccagtggtgctctcagggggac
ctcctggcagtagctgggatggagagacatggtgtccccggactcccctctgactctatc
atgaggaacgccctggtcaagttctacaatgtccaaggagaacatatctacacgttagaa
acacctgcccagcgccccatcaccaccatctgctggggccatagagactctcgtctgttt
ctggcatgtggcccggcgctgtatgtggtgcgagtggagcaccgggtggccagcctgcag
ctgctgtgccaacagggcatcgccagcgccctgcgggaggagagggacgtgggcaaacta
aacatgccttccttactctgctcctatgtcaccaccgccttcatacccaccatcaagcct
cccattcctgatcccaacaacatccgggactttgtcagctaccccactgctggcaacgag
aggttgcactgcaccatgaagcgagcggaggacaaccccgaggcagggggaccctgttac
accctatacctggaacacctaggggggctggtgcctatcctcaaaggcagacgcatcagc
aagctacgcccagagttcatcatcatggaccccaaaacagacagcaaagcaggtgggctt
ggcacaggaaaagacgaggtgtgtgtgaatgctatgatctcctacatgactgacagctgt
aactgttccgactccagcgacattgagttgagtgatgagtgggttggaaagaagtctcct
aaactatccagaggaaaccggtctcccaagcattccaggcgtagaaggaacatggaatca
agaaaatctcccaagacgtctaggactagtcaggaagggcttcgatcgccaaggttacca
acgaagaagcctctgattcgttctcccagtctgacacgtcgagagatgtccatggatgga
atctctgagcataattacctggctcaagtcacgtccaatatttgggggactaagttcaaa
attgtgggacttgcttctttcttacctgctaatcttggtgcagttatctataagacgagt
ttgctccatctacaaccaaggcagatgacaatctaccttccagaggtgcggagaatatca
cttgacttcatgagcctgccggtctttaacccaaacgtcttcagtgaggatgaggatgac
ttgccagtaacgggaccatctggagtgacaggtgacaaccctccatgtacggtcaacatc
cccatcgcgcccatccacagccccgcccaggccatgtcccccactcagagcattggtttg
gtccagtccctgctggccaatcagaacattcagctggatgtcctgaccaatcccacggct
acagcttcagcagcagcagcagcagcagcggcctcagcctctgttctggggtctgatcac
ggtcaggatgctgtggcagtacattacagtggaactctaggaaggtactccaacccagga
caggtgatatttaatgggctagagattggtcccctcctggctggaacattacctccacct
ccgcctccacataacctcccccaacaacctcaccaacaacgtcctcagtcacaacagacg
caccaacaacagcagtccaaacaaccacagcagatacaaacgcaacagcagcagcagcag
caacaacagaggatgcaacatcaacaactacagcaccaacaaccacagattccacaacat
caacaactacagcaccaacaaccacagattccacaacaacatcaacaactacaacagctt
cacatacagcagatccaacagcagcagcagcaacagactcagcagcaccaagcactgcaa
caacagtaccaacaacaacaggcggcactgcaacagcaacaacagcagatccaacagcag
caccaacacttgcaacagcagcaaatcgctcagcagcaccaacagatgcagctgcagcac
gagcaaatgcatcagcagcagcaacaaatgcagcaacaacaacagcagatccgacagcag
attatagagatgaggcagcaacagcagcagttacagcagcagcatcagcagatacaacag
caacaccaacagatgcagagacagcaccaacaaatgcagcagcaactaaagctgcagatc
accttgccccctccgcctactggctaccccaccatctctttgcagcagtttcaggtaccc
caccccagtccagagttgggaccagaaagaggacagcagggccatactcagagccatact
ctgggcaggccaagtctaccgcgatccaggcctccatcattcattgatgtagacagcata
cggtctagacctccttccttccttgaagcagacacatcaagatctaggccgccgtcattc
atcgacatagacacaatacggactagacctccttctttcattgatgtagataccggtaca
ttgcgatctagacccccgtctttcctcgatgcggactcctcccgatctagaactctttca
ttcatagacacagacacactacggtctagacctccttccttccttgatgcagagacttcc
cttgagatccagatgaggaaggtgaacgctcccccgccctacccaggaaccgtagtgtct
gcagccaccgccacaacctccaccgctcctcagaccctcatcaccaactgtgacaacccc
aacatactggtcacagcagacccttgtctgaagaaagacgagttctcactccacccagtt
ggtctccagtaccagatgggatacgagaggatcacaacctttgacagcagtggtaatgta
gaggaggtgtgtcgccctcgcagaagactcatacgcaaccagaacgcctacgctgttcaa
ggcatgggaggttctgccacacttaaagtcacctcatcgtctgacagtaagaaaatccat
cttccttacagctcagcgactctaagccgcctctcggtgccacgatactccatacccagc
ggagacccgcccccctacccagatccagccaatcaggttaacattaacacgacaacactt
cctcctccccaacgcatggacagtagtcacatgattcacgctaccttgcgacgtgacagg
cgagatggggaatcccgcttgaaggtctcccagatggttgatgcttcaaggactctaccg
tccaagtcgaagatcaacagtgctgccctagcgctctcttaccagcagagagtgccaaca
gctctgtatacctgcactcagtgcagcagcaacagcagcagcaccagtgtcagtgttagt
ggtggtggtagtagcagcagtggcattgcaggaggcactgtagtgcgacaggatttccca
ccaggaaaaggtgctcatcacagcaccatcattgtccactccaaaagcacttcacctctt
gcttctcagtcatcgtacaatctgctgagtcctattgataacagcagggataggactgta
tacgtgaattctgcctttactgaagacgaggcattaagtcagcagtgtcgtcacctgact
cttggggaggttagtttgactctgaaacgtcctccgccataccagtgggacccaaacacc
gcagaggagttctggatacctcaagaacagactatcttagttccccctccaccaccaaca
cacaaacccccacccccactcatcttcagcaatgctcagcacctggacatgacacggctg
cctttcctactctcaacaaaaccccccagcagcccaagcactgtttctttcccatcgggt
taccagatctccctgtcacctttccctccagggggaggtcagggtggacccccactccag
tcaatgcagagccctccaccaccatgccctcccaacgaagtagttgccccagttccccag
ttcacccagcaggaccccaacttggtcttgccaccgggataccctcccaaccttgccaac
ctggcttgctgccctctgccaccgatgtacccaggagctagctcctgtgccgggcttcag
ctgcaacctgttagcctgcacccctggaacccctacagcctacccatgcaggacccctca
ggctctgccaccctgcccagcaagtctcatcaactgttagagaagccagtcctctcccca
tctcctcctacggttcctcctcccccacctccttcacttcctcctcctcctccaccaacc
atgctgccaaaacccaaaagccctacagaggagctgacggaatctgccagtagcttccag
gagccgtcttctctaaatgaaagccctgttccagaccggcaggggactgacaggttcagc
aagaagagccgtaaacgtctggacagccgagctgaggaggcaaacatgaccaccgtctca
gaaggaaaatccaaaaaggaagggcgcgccctctccgacttcaactccctcatctccagc
cccaggcttggcggcagggagaagaagaaacccaaaggccagagggagcagctgaacaaa
accaagaagctcaacaggacaagtaccaccagcgagttccaggacagttccgagagtgag
cccgagctcttcatcagtggagacgaactgatgaaccagagccagagctccaagaagggc
tggaagagtaagaggagcctgaggatggccagtgaattggaagagatcaagtgcaggaag
gccaatgagagagaggaccgcgggctgggcagccagggattcgtctacgtcatggccaat
aagcagccactctggaacgaggcaacacaggtctaccagctggacttcggaggacgggtc
actcaggagtctgctaagaactttcagatcgagttggatggcagacaggtgatgcagttt
ggcagaatcgatgggaacgcctatatcctggatttccagtatcctttctcagcagtgcag
gcctttgctgtggccttagccaatgttactcaaaggcttaagtga
DBGET
integrated database retrieval system
