Oncorhynchus nerka (sockeye salmon): 115120643
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Entry
115120643 CDS
T07952
Name
(RefSeq) sodium channel protein type 8 subunit alpha-like
KO
K04840
voltage-gated sodium channel type VIII alpha
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
115120643
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
one04040
]
115120643
Ion channels [BR:
one04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
115120643
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
PKD_channel
IQ_SCN5A_C
GPHH
Motif
Other DBs
NCBI-GeneID:
115120643
NCBI-ProteinID:
XP_029505455
LinkDB
All DBs
Position
Unknown
AA seq
1184 aa
AA seq
DB search
MFAKLVAMDPYYYFQEGWNCFDGFIVTLSLVELALADVEGLSVLRSFRLLRVFKLAKSWP
TLNMLIKIIGNSVGALGNLTLVLALIVFIFAVVGMQLFGKNYKDCVCKIALDCELPRWHM
HDFFHSFLMVFRVLCGEWIETMWDCMEVAGQGMCLIVFMMVMVIGNLVVLNLFLALLLSS
FSADNLAATDDDGEMNNLQISVIRIKKGIAWFKIKLAELVLSLTKKPPVEDEQKTVDDMY
DKKLNCIANQSGVDINRELDYTKNGNGTTSGMGSSFGRYLIDEDHMSFIHNPNLTVCVPI
AVGESDFENLNTDEFSSESENENSKDLDDTSSSEGSTIDIKPDVEVEAVVVEAEEVYLDP
ENCWTPECIIKYPCCDVPITHGWGKYWWFLRKTCYLIVEHNWFETVIIFMILLSSGALAF
EDVYIQQRKTIRTILEYADSVFTYIFILEMLLKWVAYGFHKYFTNAWCWLDFFIVDVSII
SLVANALGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIF
WLIFSIMGVNLFAGKYYYCFNQTAEENFEAREVNNKTQCLALIEQNFTEVRWKNVKINFD
NVGAGYLALLQVATFKGWMDIMYAAIDSRRVEDQPIYEDNIYMYIYFVIFIIFGSFFTLN
LFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPQNKIQGLVFD
FVTQQVFDISIMMLICLNMVTMMVETDDQSDETQNILYWVNFIFIVAFTTEFVLKLFALR
HYYFTNGWNVFDTVVVVLSIAGMFLADIIEKYFVSPTLFRVIRLARIGRILRLIKGAKGI
RTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFGYVKHGAGIDDMYNFETFGNSMIC
LFMITTSAGWDGLLLPILNYPPDCDSTMENPGAPSTGNCGNPSVGIFFFVMYIIISFLVV
VNMYIAIILENFSVATEESADPLSEDDFETFYEIWEKFDPAASQFITFAKLGDFADTLEH
PLRIPKPNTIELIAMDMPMVSGDRIHCLDILFAFTKRVLGDSGELDMLRTQMEERFVQAN
PSKVSYEPITTTLRRRQEDISARCIQKAYRAHLLKRGFICKCRPKTKLENGGTNNEEKKE
STLSTASLPSYDSVTKPDKEKQEENEGERREKDRNQKDERESKF
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atgtttgccaagttggttgccatggatccctactactacttccaggaggggtggaactgc
ttcgatggcttcattgtgactctgtccttagtggagctggcattggctgacgtggagggg
ctgtccgtgctcagatcattccgattgctgagagtgtttaaactggccaagtcatggccc
acactcaacatgctgattaagattatcggtaactctgtgggcgccctgggaaacctgacc
ctcgttttagctctcatcgtcttcatatttgccgtggtcggcatgcagctgttcggcaag
aactacaaggactgtgtgtgtaagatcgccctggactgtgagctgccccgctggcacatg
cacgacttcttccactcgttcctgatggtgttccgggtgctgtgcggggagtggatcgag
accatgtgggactgtatggaggtggctggccagggcatgtgtctcatcgtcttcatgatg
gtcatggtcatcgggaacttggtggtgttgaaccttttccttgccttgctgctgtcctcg
ttcagcgcagacaatttagccgcaacagatgacgacggagaaatgaacaaccttcagatc
tccgtcatccgcatcaagaagggcatcgcctggttcaagatcaagctggcagagttggtg
ctcagcttgaccaagaagccgccggtggaggatgaacagaaaaccgtagacgacatgtac
gacaagaaactgaactgtatcgccaaccagagtggtgtggatatcaaccgtgaactggac
tacaccaagaatggtaacggcacgactagtggtatgggaagcagcttcgggaggtacttg
atcgacgaggaccacatgtcgttcatccacaaccctaacctgaccgtgtgcgttcctatc
gcggtcggagagtctgacttcgaaaatctcaacaccgacgaattcagcagcgagtcggag
aacgagaacagcaaagatctggatgacaccagctcatcagagggcagcaccatagacatc
aagcctgatgtggaggtggaggcggtggtggtggaggctgaagaagtgtacttagaccca
gaaaactgttggacacctgagtgtattatcaagtatccttgctgcgatgtgcccatcact
cacgggtggggaaaatattggtggttcctgagaaagacatgctatcttattgtggagcat
aactggttcgaaaccgtcattatctttatgatcctactcagtagtggggccctggctttt
gaggatgtgtacattcagcagaggaagactatcaggaccatcttggaatacgccgacagt
gtgttcacctacatcttcatcctggagatgctgctcaagtgggtcgcttacggattccac
aagtacttcaccaacgcctggtgctggcttgacttcttcatcgtcgatgtgtctataatc
agtctggtagctaatgcactgggctactcggatctaggtcctattaaatcactaaggaca
ctaagggccttgagacccctcagagccttgtcacgttttgaagggatgagggttgtagtc
aacgccctggtgggagccatcccctccattatgaatgtgttgctggtttgcctcatcttt
tggctgattttcagtatcatgggagtcaacttgtttgcgggcaagtattactactgtttc
aaccagacagcagaggagaactttgaggccagagaggtcaacaacaagacacagtgcctg
gccctcattgaacagaacttcactgaggtcaggtggaagaatgtcaagatcaactttgac
aatgttggcgccggatacctggctctgcttcaagtggcaacattcaaaggctggatggac
atcatgtacgcagccatagactccagaagggtggaggaccagcccatctatgaagacaac
atctacatgtatatctacttcgtcatcttcatcatctttggatccttcttcaccctcaac
ctcttcatcggtgtcatcattgacaacttcaaccaacagaagaaaaagtttggaggtcag
gacatcttcatgacagaggaacagaagaagtactacaacgccatgaagaaactgggttca
aagaagccccagaaacccattcccagaccacagaacaagatccaagggttggtgtttgac
tttgtgacccagcaagtcttcgacatctccattatgatgttgatctgcctcaacatggtc
accatgatggtggagacagacgaccagtcggacgagacgcagaacatcctctattgggtc
aacttcatcttcatcgtggcattcaccaccgagttcgtcctgaaactcttcgccctgcgc
cactactacttcaccaatggctggaacgtgttcgacacggtcgtcgtcgtcctgtccatc
gcgggcatgttcctggctgacatcattgagaagtacttcgtatcgccgaccctcttcagg
gtcatccgattggctcgaatcggccgcatcctgcgtctgatcaaaggggccaagggcata
cggactttactcttcgccttgatgatgtcacttcctgccctgttcaacatcggcctcctg
ctcttcctggtgatgttcatcttcagcatcttcggaatgtccaacttcggctacgtcaaa
cacggggccgggatagacgacatgtataactttgagaccttcgggaacagcatgatctgc
ttattcatgatcaccacgtctgcaggctgggatggtctcttgctccccatcctcaactac
cctcctgactgcgactcaaccatggagaacccaggtgcaccgtctacaggcaactgcggc
aacccctcagttggcatatttttctttgtgatgtatatcattatttccttccttgtcgta
gtcaacatgtacatcgccatcatcttagagaatttcagtgtagcaacagaagagagcgcc
gacccgctcagtgaagacgactttgagacgttctatgaaatctgggagaaatttgacccc
gccgcttcccagttcatcaccttcgcaaagctgggtgacttcgcagacaccctggagcac
cctctccgcattcccaaacccaacaccatcgagctgatcgccatggacatgcccatggtc
agcggcgaccgcatccactgcctggacatcctgtttgccttcaccaagcgtgttctgggc
gacagtggcgagctggacatgctacgcacgcagatggaggagcgcttcgtgcaggccaac
ccctccaaggtgtcgtacgagcccatcaccacgacactgcgccggcgccaggaggacata
tccgcacgttgcatccagaaagcctaccgcgctcacctcctcaaacggggcttcatctgc
aagtgcaggcccaagaccaagctggagaatggtgggaccaacaacgaggaaaagaaagag
agcacactctccaccgcctctcttccctcgtacgacagcgtgaccaaacctgacaaggag
aaacaggaagagaacgagggagagaggagagagaaggacagaaatcaaaaagatgagcgg
gaatctaaattttag
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integrated database retrieval system
