Oncorhynchus nerka (sockeye salmon): 115120802
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Entry
115120802 CDS
T07952
Name
(RefSeq) synaptobrevin homolog YKT6-like isoform X1
KO
K08516
synaptobrevin homolog YKT6
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04130
SNARE interactions in vesicular transport
one04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
115120802
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
115120802
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115120802
Membrane trafficking [BR:
one04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Ykt6
115120802
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Gene cluster
GFIT
Motif
Pfam:
Synaptobrevin
Longin
MA3
Motif
Other DBs
NCBI-GeneID:
115120802
NCBI-ProteinID:
XP_029505643
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Position
LG4:10481191..10491412
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AA seq
198 aa
AA seq
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MKLFSLSVLYKGTTKSNLLKAAFDLSSFSFFQKSSVQEFMTFTSDLIVQRSSIGSRASVK
EQEYLCHVYVRNDSLGAVVIADGEYPSRVCFTLLDKVLEEFSRQVSSIDWPSGSPDTVHY
TALDSYLAKYQNPREADAMSKVQAELDETKIILHNTMESLLERGEKLDDLVQKSEHLGNQ
SKAFYKTARKQNSCCEVM
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttttcagtctgagtgtgctgtataaagggaccaccaagtctaacctactgaaa
gctgccttcgacctgtcatccttcagcttcttccagaagtccagtgttcaggagttcatg
acattcaccagtgacctcatagttcaacgctcgtctatagggagccgagcctctgtcaaa
gaacaagagtacctgtgtcacgtgtatgtaaggaacgactccctgggtgcggtggtgatt
gctgacggagagtatccctctagagtgtgcttcaccctactggataaggtgctggaggaa
ttttccagacaggtgagcagtatagactggccctctggttctcctgacactgtccactat
actgccctggacagctacctcgccaagtaccagaatcctcgggaggcggacgcaatgagt
aaagtacaagctgagctggacgaaaccaaaatcattctgcacaacactatggaaagtctg
ttggagagaggagagaagctggatgatctagtccagaagtccgaacacctggggaaccag
tctaaagccttctacaagacggcgcgaaagcagaactcttgctgtgaggtcatgtga
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