KEGG   Oncorhynchus nerka (sockeye salmon): 115120914
Entry
115120914         CDS       T07952                                 
Name
(RefSeq) ras-related protein Rab-7a-like isoform X1
  KO
K07897  Ras-related protein Rab-7A
Organism
one  Oncorhynchus nerka (sockeye salmon)
Pathway
one04137  Mitophagy - animal
one04140  Autophagy - animal
one04144  Endocytosis
one04145  Phagosome
one04148  Efferocytosis
one05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:one00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    115120914
   04145 Phagosome
    115120914
   04140 Autophagy - animal
    115120914
   04137 Mitophagy - animal
    115120914
   04148 Efferocytosis
    115120914
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    115120914
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:one04131]
    115120914
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:one04147]
    115120914
   04031 GTP-binding proteins [BR:one04031]
    115120914
Membrane trafficking [BR:one04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    115120914
Exosome [BR:one04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   115120914
  Exosomal proteins of other body fluids (saliva and urine)
   115120914
  Exosomal proteins of colorectal cancer cells
   115120914
  Exosomal proteins of bladder cancer cells
   115120914
GTP-binding proteins [BR:one04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    115120914
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU Gtr1_RagA DUF5992
Other DBs
NCBI-GeneID: 115120914
NCBI-ProteinID: XP_029505760
LinkDB
Position
LG4:10954446..10958814
AA seq 256 aa
MGTLILFIVSMHLVVSDNLKIWAQKNMVFTQLDVTYFERYCASVCLFRSTLTCTCTSASV
KKSGPLWHRVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQER
FQSLGVAFYRGADCCVLVYDVTAPNTFKTLDSWRDEFLIQASPRDPDNFPFVVLGNKIDL
ENRQVTTKRAQAWCASKNNIPYFETSAKEAINVDQAFQTIARNALKQESEVETYDFPDQI
KLRDDRSSSSSDGCSC
NT seq 771 nt   +upstreamnt  +downstreamnt
atggggactctcattctattcattgtttctatgcatttagtcgtatccgataacttgaaa
atctgggcccagaagaacatggtgtttacacaactagatgtcacttattttgaacgttac
tgcgcaagtgtgtgtttgttccgtagcactcttacatgtacatgtacatcagcctctgta
aagaagtcaggacctttatggcacagggtagggaagacatctctgatgaaccagtatgta
aataagaggttcagtaaccaatacaaggccactataggagctgacttcctcaccaaggag
gtgatggtggatgacaggctggtcaccatgcagatctgggacacggctgggcaggagcgg
tttcaatctctgggtgtggcgttctaccgtggggctgactgctgtgtgctggtctatgat
gtcacggcgcccaacacctttaagactctggacagttggagggatgagttcctgatccag
gccagccccagagacccagataacttcccctttgtggtgctaggcaacaagattgacctc
gagaacagacaggtgacaacaaagcgtgcccaggcctggtgtgccagtaagaacaacatc
ccttactttgagaccagtgccaaggaggccatcaacgtagaccaagcattccagaccatc
gcccgcaacgccctcaaacaggagtctgaggtggagacgtatgactttccagaccagatc
aaactgagagacgaccgatcctcctcctccagcgacggctgctcctgctga

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