Oncorhynchus nerka (sockeye salmon): 115120980
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Entry
115120980 CDS
T07952
Name
(RefSeq) LOW QUALITY PROTEIN: sortilin-like
KO
K12388
sortilin
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
115120980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
BNR_6
DUF4245
Motif
Other DBs
NCBI-GeneID:
115120980
NCBI-ProteinID:
XP_029505831
LinkDB
All DBs
Position
Unknown
AA seq
821 aa
AA seq
DB search
MTWRLLVLGGACLLLMGVRGQCKEQRNRRTVSFHQTQQDGDQRQVLSRPERDTTASPRPT
FTACKLPLTPLEHRVLDQNTHETGFHGDDGSSFTVIWVGDGTGVILVLSTISAPLHSFFE
GGSSRLYRSADYGKSFHDISHLINNTFIRKEFGLLAGPGNSQQVILTADTPVLDNNGGVI
FTSTDAGVSFKSVQLPFHPAQPITFHFLNPEYLVVISIDGGLWLSLDFGAVWKKVHEGTQ
SFTWGSGITLFFSFSPKGTVEADRRGELFLKRTEDLGKTFTTVAHSIFSFGYVGGFLFTS
VIETLGAPRVIYVSSDQGDHFNKAQLPSASTEQFYSVLDGDEDMIFMHVDNPGEESYFGT
VYTSDDRGILYSKSLERHLFGGEGKSDFTNVTSMRGVYLTNILEEDGRIRTVISFNRGGE
WTLLNKPQNVECGEDSRNDCNLHIHGEYSRYNGITPMLPLSDPTAVGLVIAHGSVGDSIS
STRPDVYVSEDGGYKWRGSLRGPHHYSILDAGGLVVAVEAHPMDGQINTIKFSTDEGQCW
KVYNFTEQPIFFAGLTSEPGTKTMNISVWGYRPEDDHQPMWVVVTIDFQSLLTRECGNQD
YVQWLAHATEGGDLATEGCVLGYKETFRRLRKLSVCRNGRDYVVSRQKSPCPCTREDYLC
DYGYYRHENSSECMRQLDTADHALEVCLNGEEEELRTSGYRKVPSDKCEGGFTPLRIKET
VNRHCGNSSHPPTASPYSETPREKMLLIVVCVGSGIVILVAVAAAVYTVRRMGYGNRAPT
YRFSVLQLQDDVCSIAADPESVASSNGTSVFPVDSDDDLIE
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atgacttggagactgttggtcctcgggggggcatgcttgcttcttatgggtgtgaggggt
cagtgcaaagagcaacgaaaccggagaacggtgtctttccatcagactcagcaagatggg
gaccaacgccaagtcctctcacggccagaaagggataccacagcttctccaagacccact
ttcaccgcttgtaaactccctctcacaccattagaacaccgggtgttggatcaaaataca
cacgagacagggtttcatggtgacgatggctccagttttactgtcatatgggttggagac
gggacaggggtaatcttggtgttgtctacaatcagtgctcctctacattccttcttcgag
ggcggttcttcacgattgtaccgcagtgcagactatggcaagtctttccatgatatttct
catctcatcaataacaccttcataaggaaggaatttggacttctggctggaccagggaac
tctcaacaggtgattctgactgcagacacaccggttttggacaacaatggtggcgtcatc
tttacctcaactgacgccggagtgtcgtttaagtctgtccagctgccttttcacccggcc
cagccaatcaccttccacttcttgaatcccgagtacttagtggtcatcagcatagatggc
ggcctgtggctttctctggactttggggctgtgtggaaaaaggttcacgaaggaacacaa
tctttcacgtggggctccggcatcactctcttcttcagcttcagtcccaaaggaacagtg
gaggcagacagaagaggagagctgttcctaaagaggacagaagacctggggaagacgttc
accaccgtggcacacagcatcttctccttcggctatgtaggaggcttcctcttcacctca
gtcatagagacactgggagccccacgtgtcatctatgtgtcctcagaccaaggggaccac
ttcaacaaggcccagctcccctccgcctccactgagcagttctactcggttctggatggg
gatgaggacatgatcttcatgcatgtggacaatccaggagaggaaagctactttgggacc
gtgtacacatcagatgaccggggcatcctgtactctaagtctctagagcgccacctgttt
ggtggggaagggaagagtgacttcaccaacgtcacctccatgagaggagtgtacctcacc
aacatactggaggaggacggccgcattcggacagtcatttcattcaaccgagggggagag
tggacactcctcaacaagccccagaatgttgagtgtggtgaggattcaagaaatgattgt
aacttgcacatccacggtgaatacagtcgctacaacggcatcactcccatgctgcctctc
tctgaccccactgccgttggccttgtcatcgcccacggcagtgtgggggactccatctcg
tcaacacggcctgacgtgtacgtgtcggaggacggggggtacaagtggaggggatccctg
aggggccctcatcactacagcatcctggacgctggggggctcgtcgtggctgtggaggcc
caccccatggacggccaaatcaacaccatcaagttctccacagatgagggccagtgttgg
aaggtgtacaactttacagagcagcccatcttcttcgctggcctgacatccgagccgggc
accaagaccatgaacatcagtgtgtggggctaccggcccgaggacgaccaccagcccatg
tgggtggtggtcaccattgacttccagagtctcctcaccagagagtgtggtaaccaggac
tatgttcagtggttggcccatgccacagagggcggggacttggccacagaggggtgtgtc
ttgggctacaaggagaccttcaggaggctgaggaagctgtccgtctgcaggaatggacgg
gactacgtggtgagcaggcagaaaagcccctgcccctgcaccagagaggactacctatgt
gactatggttactatcgtcatgagaacagctcagagtgtatgagacaactggacactgca
gaccacgccctggaggtgtgtctaaatggagaggaggaggagcttaggacatcggggtac
cgtaaggttcccagtgataagtgtgagggaggtttcactcccctgcgcataaaggagaca
gtcaacaggcattgtgggaactccagtcatccccccactgccagcccatattctgaaacc
ccgagagagaagatgctgttgatcgtagtttgtgttggatcggggattgtcattctggtg
gctgttgccgctgctgtctatactgtaaggagaatgggctatggaaatagggcgccaacg
tatcgcttctctgtcctgcagcttcaggacgatgtctgctccattgccgccgacccagag
agtgtcgccagtagcaacggaacatcagtctttccagtggattcagatgatgatcttatt
gaatga
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