Oncorhynchus nerka (sockeye salmon): 115121031
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Entry
115121031 CDS
T07952
Name
(RefSeq) junction-mediating and -regulatory protein-like
KO
K24045
junction-mediating and -regulatory protein
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115121031
Membrane trafficking [BR:
one04131
]
Autophagy
Other autophagy associated proteins
Others
115121031
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JMY
WHAMM-JMY_N
WH2
DHO_dh
Motif
Other DBs
NCBI-GeneID:
115121031
NCBI-ProteinID:
XP_029505914
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All DBs
Position
LG4:complement(11471160..11536191)
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AA seq
917 aa
AA seq
DB search
MSFMMEDSVESDWVAVRPNVFDEKERHKFIFIVAWNEIEGKFAITCHDRTVQKRTAFRDS
LLETVECDLVSPVTVKLAPEADKHKTPIKSPTKRKDDISTLVKVRCNVSPKEIKTTKSHI
RERTAAVGSSSRPAERVIKTLGSWDIVSCKVTDIEVLEPADVPSLLRSPDDGDGEESDSS
REGYSWAGLFSFQDVRAAHVQLCAVNSDLEPCLPPFPEEPVGMWTVLFGAPEVSQRETDA
LCYQLQVYLGHALDTCGWKILAQVLFTESDDSEEYYESLSELRQKGYEDALQRAKKRLQE
LLERHRAMESMVELLQVYPEEDEAYGELLEATTQLYHYLLQPFRDMRELAMLRRQQIKIS
LETERLGPRRVEGLRREDEEWTRKAHAAVLSIQDLTVKFFETTARAQKAVYERMRVDQRK
FGKSTWAAAVDRVERLQYAVSKETLQLMRAKEICLEQRKHGLKEEMQSLQEGEDAIQRLD
QMEALYYELQLQLYDIQAEVLRCEELLLNAQLTSLRRQITERQDEVVYYDAYESPDAMRR
LEDPSASLPPLRDKLSQLQQRTRQLEARRGRITAKKAYLKTKKEICIINHNQKIQQRQGS
KDDQTHLALQQRGEEQEEEEERSNARMSLDRSRTLDRLRSFKQRFPGQVTLKSSRLRMSH
GHSRRKTSTPLSPVGRPETLAASVQTDTVDLPELFAPPSDACGHQSVSLPPLGGATGPLS
APSLPPLSAIPSSAPPPPPPPPPPPPPSLDDLSSEGVEWAHPTSPVRQSKAGSDSEPLPL
APFSPRFFDSSQLQTARKKLKKTAMLDSSQWRRASSPMDEVLNSLKRGSFHLRKAELRVL
APDPDDDESNNILAQIRQGVRLKKVRTRPEQRHTKGLFPHSADALTRSIHEALRRIKEAS
PESESEDEGLPYTDWEN
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgtcattcatgatggaggattctgtagagtcggactgggtggccgttcgaccaaatgtt
ttcgacgaaaaggaaagacacaaattcattttcatcgttgcttggaacgagatcgaggga
aagttcgccataacctgccacgatagaacagtacagaaacggacagcgtttcgggattcg
ctattggaaactgtcgaatgcgacctcgtatcccccgtcaccgtcaaactagcccccgag
gcagacaaacacaaaactccaataaaaagtcctaccaaaaggaaagatgacatctccaca
ttggttaaagttagatgtaacgtaagcccgaaagaaataaaaacgacaaagagccacatt
cgagagagaactgcggcggtgggttcctcctcaaggccagccgagcgtgttatcaaaaca
ctgggatcgtgggacatcgtgtcctgcaaggtgaccgacattgaggtcctggaaccagcg
gatgtccctagtttgcttcgctccccggatgatggcgacggagaggagtcggacagcagc
cgagagggctacagctgggctgggctattctccttccaggacgtccgggcagcccacgtt
caactctgcgcggtcaactcggacctggagccctgtctgcccccctttcctgaggagccg
gtgggcatgtggacggtgcttttcggggccccggaggtgtcccagcgggaaacggatgcc
ctgtgttaccaactccaggtgtacctgggccatgctctagacacctgtggctggaagatc
cttgctcaggtgctttttacggagagtgatgactcagaagagtactatgagagtttgagt
gagctgagacagaagggttatgaggatgctctccagagggccaagaaacgtctccaagag
ctgctggagaggcaccgggccatggagagtatggtggagctgctgcaggtgtatccagag
gaggatgaggcctatggagagttactggaggctacaacacaactctaccactacctgcta
cagcccttcagagacatgagagagctggccatgctgcgcagacagcagatcaagatctcc
ttggagacggagcgtctggggcctcgtcgtgtggaggggctgaggagggaggatgaggag
tggacgaggaaggctcacgctgccgtcctctccatacaggaccttaccgtcaagttcttt
gagaccaccgccagggctcagaaagcagtgtatgagcggatgcgtgtggaccagaggaag
tttggcaagtcgacgtgggctgcagctgtggaccgcgtggagcgtctgcagtacgccgtc
tccaaggaaacactgcagttgatgagggccaaggagatctgcctggagcagagaaaacac
ggcctgaaagaggagatgcagagcctgcaggagggagaggatgccatacagcggttggac
cagatggaggcgctgtactatgagctccagctgcagctctatgacatccaggctgaggtg
ctgcgctgtgaggaactgctgctcaacgcccagctcaccagcctccgcagacagatcact
gagcggcaggacgaggtagtgtactatgatgcgtatgagagtcctgatgccatgcggagg
ttagaggacccctcggcctctcttccccctctcagagacaagctcagccagctgcagcag
aggaccagacagctagaggcacgcaggggacgcatcaccgccaagaaggcctaccttaaa
accaaaaaggagatctgtatcatcaaccacaaccagaagatacagcaacgccaaggtagt
aaggatgaccagacccatctagcactgcaacagcgaggggaggagcaggaggaagaggag
gagaggagtaacgccagaatgagtctggataggtcgagaactctggacagactacgcagc
ttcaaacagcgtttccctggtcaggtgactctgaagtccagcagactgcgtatgtcccac
ggccactcccggaggaaaacctccactcccctctcccccgtggggaggcctgagaccctg
gctgccagtgtccaaacagacactgttgacctccctgagctctttgctcctccctctgat
gcctgtggtcatcagagtgtctctctacccccgctagggggcgccactgggcctctctct
gccccctctcttcctcccctctcagcgattccctcctctgcccctccacctcctcccccc
cctcctcccccaccccctccctccttagatgacctctccagtgagggagttgagtgggct
catcccactagcccagtccggcaatccaaggctgggtcagattcagagcctctccccctg
gctcccttctccccacgtttctttgacagcagtcagctgcagacagccagaaagaaactg
aagaagacagccatgctggactcctcacaatggaggagagcgagttctcccatggacgag
gtcctgaactccctgaagagaggcagcttccacctgcgtaaggctgagctgagagtccta
gcccctgacccagacgatgacgagagcaacaacatcctggcccagatccggcagggtgtc
cggttgaagaaggtgcggacgcggccggaacagcggcacaccaagggcttgttcccccac
tctgccgacgctctgacccgctccatccatgaagccctgagacgcatcaaggaggcttcg
cctgagtctgagtctgaggacgaaggcctgccctacaccgactgggagaactag
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