Oncorhynchus nerka (sockeye salmon): 115121089
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Entry
115121089 CDS
T07952
Symbol
wdr41
Name
(RefSeq) WD repeat-containing protein 41 isoform X1
KO
K23610
WD repeat-containing protein 41
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
115121089 (wdr41)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115121089 (wdr41)
Membrane trafficking [BR:
one04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
115121089 (wdr41)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_TEP1_2nd
WDR55
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR75_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_IP5PC_F
WDR90_beta-prop_4th
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
115121089
NCBI-ProteinID:
XP_029505976
LinkDB
All DBs
Position
LG4:11940582..11952258
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AA seq
450 aa
AA seq
DB search
MLRWILGGREAQGSVEKNPVLFIGEEQPKNWFTELQVLKGHFDIVRFLVQIDDFRFASAG
DDGLVLVWNVETGERLLELRGHSQQITAMTAYTHTSGENTHTSLITASSDRTLSLWDPET
GNRVQTVSDLQSSVKCLLVLERLCVWVSGGNELCVWNRDFQLQCQSQHHDDTGISAMVEL
PKNCIAAAMDKDIVIFRLTMSTGSRLSVAEVRRLSDHQDSIHALININDGLFASGSHVGE
LILWDAVDWTIMAYEHILWEESQTDTQAEIRLAAPKPSEMSIQQLTSDGELMVAAVGSGL
YVYSVITKSVVAYRKTAHDSNVLHTMLLPDGGLMSCSEDGSVRIWEMQDLLLPAEPASAG
FFGMWTFGRSNKQAGPPVKKVLELPSLRTLELTGDLIGHSGAVQMFVSFGEKGLVTCSTD
HLLIAWKNGERESHLRSLALFRKLEENGGL
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgatggatactcggtggtcgggaagcacaggggtctgtcgagaaaaaccctgtg
ctattcattggggaggaacagcccaaaaactggttcactgaactgcaggtgctaaaagga
cattttgacattgttcgatttctggtgcagattgatgacttcaggtttgcgtctgcagga
gacgatggtctggtgttggtgtggaacgttgagacaggagagaggctgctggaactaagg
ggtcactcccagcagataacagccatgacagcctacacacacaccagtggagagaacaca
cacacctccctcatcacagcttcctcggaccgcaccctcagtctgtgggacccagagaca
ggcaacagggttcagaccgtctcagacctccagtcctctgtcaagtgtctgctggtgttg
gagcggttatgtgtgtgggtgtcgggaggaaatgagttgtgtgtgtggaacagagacttc
cagctgcagtgtcagagccagcaccacgacgacacaggaatcagtgccatggtggagttg
cctaagaactgtatagcagcagctatggacaaagatatagtgattttcaggctgaccatg
tccacagggtcccggttgtctgtggcagaggtcagacgtctatctgaccaccaggacagc
atccacgctctcatcaacatcaatgatggcctatttgccagtgggtcccatgttggcgag
ctgatcctgtgggacgctgttgattggacgattatggcctatgagcacatcctgtgggag
gagtctcagaccgacacccaggctgagatccgattggccgctccgaaacccagtgagatg
tccatccaacagctgacatccgatggagagctgatggtggctgcagtgggcagtggtctg
tatgtgtacagcgtcatcactaagagtgttgtggcctacaggaagacagcccacgactcc
aacgtactacacaccatgctgctgcctgatggggggctgatgtcgtgctccgaggatggc
agtgtgaggatttgggagatgcaggacctcctgttacctgcagaaccagcctctgcaggg
ttctttgggatgtggactttcggcaggtccaataagcaggcggggcctcctgtgaagaag
gttcttgaactccccagtctcagaacattggaactgacgggcgacctgattggacactca
ggggccgtgcagatgtttgtgagttttggggagaagggtctggtaacatgttctacagac
cacctgctgattgcatggaagaacggagagagagagtctcacctccgcagtctcgccctc
ttcaggaaactggaggagaacgggggactctga
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