Oncorhynchus nerka (sockeye salmon): 115121162
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Entry
115121162 CDS
T07952
Symbol
gtf2f1
Name
(RefSeq) general transcription factor IIF subunit 1 isoform X1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
115121162 (gtf2f1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
one03021
]
115121162 (gtf2f1)
Transcription machinery [BR:
one03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
115121162 (gtf2f1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
115121162
NCBI-ProteinID:
XP_029506053
LinkDB
All DBs
Position
Unknown
AA seq
540 aa
AA seq
DB search
MASLGGSSSSSTEYIVRVPKNTSKKYSIMAFNSGDKVNCSSWTQARMERDMSNRRMYGVE
ETEEGAAGSEFGKKQREEARRKKFGIVTREFKVEDQPWILKVNGKAGKRFKGTKKGGITE
NASYYIFTQCPDGAFEAFPVNGWYNFVPQAKHRTLTAEEAEEEWGRRNKVVNHFSIMLQR
RLREQERGPDDDDEEGEKGGKKKKKKGGRGGDLRIHDLEDDLELSSDESDSSGGEDGDSK
PKKKEGDVKGKGKKKKKKKRGSDSEANEDSDDGDFEGLEVDYMSDESSSEEEVGEEKAKS
NKEAVPKGIDEASESEEESEEEKPNEEEGKEEEEEEEGKKTPVQTKKKRDSSGESDTSED
SDIDGEAASALFMVKKRTPTKRGGGRGSGGSSRTGSRPGTPSIDSASTSNTLRAAASKLE
QGKRQVVGGSSESPAAKRLKMESSSTAVTTQSPAPSGKSTPQPPSGKSTPSSSDVQLTEE
AVRRYLIRKPMTTKDLLKKFQTKRTGLSSEQTVNVLAQILKRLNPERKNVNDKMHFYLTE
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcattgggtggcagcagttcctcttctacagagtacatagtccgggtccccaag
aacaccagtaagaagtacagcatcatggcctttaactctggggacaaagtaaactgctcc
tcctggacccaggctcgtatggagcgggacatgagtaacaggaggatgtatggtgtggag
gaaactgaggagggggcggcaggcagtgagtttgggaagaagcagagggaggaggcacgc
aggaagaagtttggaatcgtcaccagggagttcaaggtggaggaccaaccctggatcctc
aaggtcaacggcaaggcagggaagaggttcaagggtacgaagaaagggggcataacggag
aatgcgtcctactacatctttacccagtgtcccgacggggcctttgaggccttccccgtc
aacggttggtacaacttcgtgccccaggcgaaacaccgcacgctgaccgccgaggaggca
gaggaggagtggggcaggaggaacaaggtggtgaaccacttcagcatcatgctccagagg
cgcctgcgggagcaggagagagggccggacgatgacgacgaggagggcgagaaggggggg
aagaagaaaaagaagaagggaggaagaggaggggacctgcgcatccatgacctggaggat
gacctggagctgagcagtgatgagagcgacagcagtggaggagaagatggagacagcaag
cccaagaagaaagagggggatgtgaaggggaaggggaagaagaagaagaagaagaagagg
ggcagtgacagcgaggctaatgaggacagtgacgatggagactttgagggcctggaagtc
gactacatgtcagatgagagcagttcagaggaagaggtcggcgaagagaaggccaagtcc
aataaagaggctgttcccaaaggaatcgacgaggcatcggagagtgaggaagagagcgag
gaggagaaaccgaacgaggaagaggggaaagaggaggaggaggaagaggaagggaagaag
actccagtccagacgaagaagaagagagacagcagtggtgagtcggacacttcggaggac
agcgacatcgatggagaggcagcctccgctctcttcatggtgaagaagcgtactcctact
aagcgcggtggtgggcgtggctctggaggcagctccaggactggcagtcggcctggaaca
ccgtccatagactccgcctccacttccaacacactccgagccgccgctagcaaactggag
caaggtaagagacaggtggtgggtggtagctctgagtctccagctgccaagaggctgaag
atggagtccagcagtacggctgtcaccacccagagtcctgccccctcagggaagagcacg
ccacagcccccctcaggcaaatcaacccccagttccagtgacgttcagctgacggaggag
gcggtgcgtcgctacctgatccggaagcccatgaccaccaaggacctgttgaagaagttc
cagaccaagaggactggcctgagcagcgagcagacggtcaacgtcctggcccagatcctc
aaacgcctcaaccccgagaggaagaacgtcaacgacaagatgcacttctacctcacagag
taa
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