Oncorhynchus nerka (sockeye salmon): 115121167
Help
Entry
115121167 CDS
T07952
Symbol
pex1
Name
(RefSeq) peroxisome biogenesis factor 1
KO
K13338
peroxin-1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
115121167 (pex1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115121167 (pex1)
Membrane trafficking [BR:
one04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
115121167 (pex1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
PEX-2N
PEX-1N
AAA_lid_3
AAA_16
AAA_22
AAA_14
nSTAND3
TIP49
NPHP3_N
RNA_helicase
ATP-synt_ab
AAA_5
AAA_28
AAA_18
ABC_tran
DUF815
RuvB_N
NACHT
IstB_IS21
ORC-CDC6-like
Motif
Other DBs
NCBI-GeneID:
115121167
NCBI-ProteinID:
XP_029506063
LinkDB
All DBs
Position
Unknown
AA seq
1272 aa
AA seq
DB search
MLGNHGIQPVTLIFHNTKNCFLHLPPNLLKQLSLQDNQALELSWGHDARVFLSWTRSRSP
ANQEDHKVALSRQLGEKLGLRDGEQGFLRSCQQVLSVQQVFVEPLSSDDWEILELHSAEL
EQQLLDQIRVVFPDAVFPVWVDQRTVIYIRIASLTPTVPYGRLEQFTELHVSPKIRAGSE
DCAPFGSSLSNQNMPLHRQPNFDLSPSSRSSQEFSVQGTGLPVEQHPNAAALQSPRQWGG
ITDVKSLVRYMLTGNCDPVRETPPIPTIPALLSDSVFRVCRAPPVSPGPLSATHGVAHIL
PWGQQMGGNINGGQPAVTYGLLSKVLSPKEVRERAKQAMERKKSGGGAGGAPQPGGAGGA
GDGEEKEDATVVKVVCHLTEGLKGKQGSSREGELHSGRVWIPQSLQTSLHINPHTSVRIK
PIKSTPKVATSIHLQPLQPLPAAESEVEIQTAFLGWLHTQSHEPLACLTGRSNTIFLPAT
EGKVEFALTVLKSEPEPESKAPDQLFLLAPCVIQKTDIQVVREPVTVPTMKAMGETPNQD
LPSLSSLGGVEELIRTGFDFLSHSLMGRPLSWELVSTGRGLRGGALLITGARGSGKTALS
RALCRKTMEDLDAHVEVVDCKKLKGKRAETVRQILEEVFEQAVWRQPSVVLLDDLDHVTG
APTSPEHEHGPEALLRLHIAQSLRDMVHDVVVRSSLVSLVVSSHSEHSLHPSLREVQGSH
FLQGFIHIQPPDQAQRGEILRCLILSKTAVSKETLHMLDLGIIAKETEGYLPRDLALLLE
RAIHANALHRARSTQGVCLSWRDFVQALKGFTPPTLWGAQLQSPSGAGLERVGGLHQVRQ
LLMDTILLPAKYPVLFSSLPIRQRSGLLLYGAPGTGKTLLAGAVAKESGMNFISIKGPEL
LSKYIGASEQAVRDVFQRAQAAKPCILFFDEFDSLAPRRGHDNTGVTDRVVNQLLTQLDG
VEGLQGVYVLAATSRPDLIDPALLRPGRLDKSLYCPPPDQEARVEILRALSHSVPLADDV
DLEQMAGATDTFTGADLKALLYNAQLEAIHSSLGPSLLHDLGSGSDSDISLSSMIFLNHS
SGSDDSTGEGERGCGLDHSMVLLDLSDVPPEDPRGNIWRLYFGSSFESELGNPSPTGLNS
QAVSGPNSNDLTGASVRDPGFSHPPAYMSSLQDGYEELSHEQLDRLRLEISNIKSNYRRA
TEDSVPVQGGPIRTGLLLCQAHLTSALNATRASLSKQDWRRYTDLYESFGASGEGKSQST
VTFKPGQRVTLA
NT seq
3819 nt
NT seq
+upstream
nt +downstream
nt
atgttgggcaatcatggcatccaacctgtcactctgattttccacaacacgaaaaactgt
tttcttcaccttcctccaaacttgttaaaacagctctctctccaagacaaccaggccctg
gagctgtcctggggtcatgatgcccgtgtattcctcagctggaccagaagcagaagccct
gccaaccaggaggaccataaagtagcgctgagcaggcaactgggagagaagcttggactc
agagatggagagcagggcttcttgaggtcgtgccagcaggtcctgtctgtacagcaggtg
tttgtggagccactctcctctgacgactgggaaatcctggagctccacagtgcagagctg
gagcagcagctcctggatcagattagagtggtgtttcctgatgcagtgtttcctgtgtgg
gtggaccagagaacagtcatctacatcagaatcgcttcactcaccccaactgtgccgtac
ggtcgattagagcagttcacagagctacacgtctctcctaaaatccgtgctggaagtgag
gattgcgctccttttggatcatccttatccaatcagaacatgcccctccacagacagccg
aactttgacctctcaccctcctccaggtcctctcaggagttcagcgttcaggggactgga
ctccctgtagaacaacatcctaacgctgctgccctccagagcccccggcagtggggcggg
ataacagacgtaaagagcctggtcaggtacatgctaacagggaactgtgaccctgtgaga
gagactccacccatccccaccatccctgccctcctcagtgactcagtcttcagagtgtgc
agagcaccgcccgtgtctcctggccctctgagtgccacccatggggttgcccacatccta
ccctggggccagcagatgggaggtaatatcaatggaggccagccagctgtgacgtatggc
ctactgtccaaggtgctctctccaaaggaggtgagagagcgggctaagcaggccatggaa
aggaagaagagtggcggcggggctggtggtgctccccagccaggtggtgctggtggggca
ggagacggggaggaaaaagaggatgccactgtagtcaaggtggtgtgtcaccttacagag
gggttgaaagggaagcagggatcatctagagagggagagctccacagtggaagggtctgg
atcccacaatccctgcaaactagtcttcatatcaacccacacacatcagtgagaatcaag
ccaatcaagtcaactcctaaagtagccaccagtatccacctgcagcctttacaaccactg
cctgcagcagagagtgaggtggagattcagactgccttcctgggttggctgcacacccag
agccacgaaccactagcctgtctgaccggccgctccaacaccatcttcctacctgccact
gaaggcaaggtggagtttgctctgactgtgttgaagtcagaacctgagccggagagtaaa
gcgcctgaccagttgtttctgttggctccatgtgtgatacagaaaacagacatacaggtt
gtcagggaacctgtaactgtgcctacaatgaaagccatgggtgagacacctaatcaagat
ctaccctctctcagcagtcttggtggtgtggaggagctgatcaggacggggtttgacttc
ctctcccacagcctgatgggacggcctctctcctgggagctggtgtccaccggccggggc
ctccggggcggagccctactcatcacaggggccaggggaagtgggaaaacggcactctcc
agagctctgtgtaggaaaactatggaggacctggatgctcatgtggaggtggttgactgc
aaaaagctgaaagggaagagagcagagaccgtgaggcagatattggaagaggtttttgaa
caggcggtgtggagacagccctctgtggtcctgctggatgacctggatcatgtgacgggg
gcaccgacctcaccggaacatgaacacggaccagaggctctgctaaggctgcacattgcc
cagagtctaagggacatggtacatgacgtggtggtgcgctccagcctggtgtctctggtc
gtcagtagtcacagtgaacattccctccacccgtcactcagggaggtgcagggctcccac
ttcctccagggcttcatacacatccagcctcctgatcaggcccagagaggagagatcctg
cgctgtctgatcctcagtaagactgctgtatccaaggagaccctacacatgctcgacctg
gggattattgccaaggaaacagagggctacctgccccgtgacctggccctgctgctagag
agggccatccatgccaacgccctacacagggcacgcagcacccagggagtgtgtctgtcg
tggagggattttgtgcaggctctgaagggcttcacccctcccactctgtggggggctcag
ctgcagagccccagtggtgcaggccttgagagggtagggggactgcatcaagtacgccag
ttactcatggacaccatcctgctaccggccaagtatccggtgctcttctccagccttccc
atccggcagcgctcaggacttctgctgtacggcgctccaggcactgggaaaaccctgctg
gctggtgccgtggccaaggagagtgggatgaacttcatcagtatcaagggtcccgaactc
ctcagcaagtacattggagccagtgagcaggctgtcagagacgtcttccagagagcccag
gctgctaagccctgcatcctgttctttgatgagtttgactccttggcacccaggaggggt
cacgacaacaccggggtcactgatcgggtggtcaaccagctactgacccagctggatggg
gtggagggactacagggtgtgtatgtcctggctgccactagtcgtccagacttgatagac
cctgccctgctgaggcctggccgcctggacaagtctctctactgtccccctcctgaccag
gaggcgcgtgtagagatcctgagggctctgagccactcggttcccctggctgacgatgtg
gacctggagcagatggccggggccacagacacgttcactggcgctgacctgaaggccctg
ctgtacaatgcccagctagaggccatccacagcagcctggggcccagcctgctgcacgac
ctggggtcgggttcggacagcgacataagcctgtcctccatgatctttctgaaccacagc
agtgggtctgatgactcaactggggaaggggagagagggtgcgggctggaccactccatg
gtgctgctggacctcagcgacgtcccccctgaggacccccgtggtaacatctggaggctg
tacttcggcagctcctttgagtccgagctgggcaacccttcccccacaggactgaactcc
caggctgtctcggggcccaactctaatgacctgactggtgcgtcggtcagagaccctggc
ttctcccaccccccggcctatatgtcctctctacaggatggctacgaggagctcagccat
gagcagctagaccgcctccgtctggaaatcagcaacatcaagagcaactacagacgagct
actgaggacagtgtccctgtccagggtggccccatcaggacaggtctgctcctgtgtcag
gcccacctcacctcagccctgaatgccaccagagcctccctcagcaagcaggactggagg
aggtacactgacctgtatgagtcctttggagcttcgggagaaggaaagtctcagagcaca
gtgacgttcaaacccggccaaagagtaacgctcgcttaa
DBGET
integrated database retrieval system
