Oncorhynchus nerka (sockeye salmon): 115121320
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Entry
115121320 CDS
T07952
Name
(RefSeq) programmed cell death 6-interacting protein-like
KO
K12200
programmed cell death 6-interacting protein
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03250
Viral life cycle - HIV-1
one03272
Virion - Hepatitis viruses
one04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
115121320
03272 Virion - Hepatitis viruses
115121320
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
115121320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115121320
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
one04147
]
115121320
Membrane trafficking [BR:
one04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
115121320
Exosome [BR:
one04147
]
Exosomal proteins
Proteins found in most exosomes
115121320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRO1
ALIX_LYPXL_bnd
AAT
DUF2226
T2SSM
YkyA
Zw10_N
Motif
Other DBs
NCBI-GeneID:
115121320
NCBI-ProteinID:
XP_029506239
LinkDB
All DBs
Position
Unknown
AA seq
833 aa
AA seq
DB search
MATFISVPLKKSSEVDLVKPLSKFVTATYPAAEEQADYIRSVEELNKLRKSALGRPLDKH
ESSLEILLRYYDQLCAVEPKFPFSENQLCLTFTWKDAFDKGSLFGGSVKLAPVKSLDTPT
HTNLDSDEGLKAAAKYYQLASGAFGHIKDTVLSALNREPTMDISPETVGTLSLIMLAQAQ
EVFFLKATSDKMKDAIIAKLANQTADFYGDAFKQCQYKENLPKEVLPVLAAKHCIMQANA
ELHQSLLAKQKKRFGEEIARLQHATELVKTVASRYDEYVSVKDLSDKIIRALTAAKKDND
FIYHDRVPEVKDLEHIGKAALVKATAITPPLSAKFTDLFEKMVPMAVQQSMSVYSQRKAE
TVNRLVGTMREATNLCNGVLASLNLPAALEDLSGDSIPQSIVEKARAIVQQGGLQSIEQL
IRDLPELLTRNREILEESLKMLGDEESTDSELRSKFSQRWNRTPSGDLYKPLRAEGGNFR
SVLDKAVQADQVVRERYNTHCEMIALLCKPEAELTAAIPSANPVKTLQGSEVVSVLRSQL
AQLEEVKKEREGLEVEIKGVAFDMSSSFLTALAQDGAINEEALSMSQLDQSYGSYSQRVQ
ASLRSQEELLGKVQASHQEFSKLKQSNSEANDREEVLKKLASAHDSYVEITSNLREGTKF
YNDLTEILLKFQNKCSDIIFARKTERDELLKCVVVMSSLSRSQQPQVKAQPPQRPPPPAF
TPQAASAPGNPPDNQPQPGNPPPMAPPSQAQGPPYPTYQGYPGYAYQMPMGYNPYAAYSQ
YNMPPAMQPNMQPYVPYQQAPAPGQGGFPGTPPTQQHPYNLPTSSPHTHHNQP
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atggcgacttttatttctgtcccgttaaagaagtcgtctgaagtagatctagttaaacca
ctttcgaaattcgtcacggcgacatacccagcagctgaggagcaagcggactacatccga
tccgtggaggagttgaacaagctgcgcaagagtgctctggggaggccgctcgacaaacac
gaaagctcactggaaatcctcctgaggtactatgaccagctgtgtgctgtggagcccaag
ttccccttctctgaaaaccagctgtgtctaaccttcacatggaaagatgcctttgataaa
ggctcactgttcgggggctcagtcaaactagcacctgtcaaaagtttggacacacctact
cataccaacctggacagcgacgaaggactgaaggccgcagccaaatactaccagttggcg
agtggagcatttggtcacattaaggacacagtgctgtcagctctgaacagagaacctact
atggacatctctcctgagactgtaggaaccctcagtctcatcatgctggcccaggcacag
gaggtcttcttcctcaaggctacgtcagataagatgaaggacgccatcatcgctaaactg
gcgaatcagactgcagatttctacggtgacgccttcaagcagtgccagtacaaagagaac
ctgcccaaggaggtgctgccggtgttggcagctaaacactgcatcatgcaggccaacgct
gaactgcaccagtctctcctcgccaagcagaagaaacgctttggagaggagatcgctcgc
ctacagcacgctacagagctggtgaagactgtagcgtctcgctatgacgagtacgtcagt
gtgaaggatttgagcgataagatcatccgcgctctgacggccgccaagaaggacaacgac
ttcatctaccacgaccgcgtccccgaggtcaaagatctggaacacatcggcaaggcagcg
ttggtcaaggctaccgccatcacacctccactcagcgccaagttcactgacttgtttgag
aagatggtgcccatggctgtgcagcagagtatgagtgtgtacagccagaggaaggctgag
accgtcaacagactggtgggaaccatgagagaagctaccaacctctgcaacggtgtcctg
gcatctctgaacctgcctgcggctctggaggacctgtctggagattctatcccacaatcc
attgttgagaaggcccgtgccatcgtccagcagggggggctgcagagcatagagcagctg
atcagagatctgcctgaactactgacacgaaaccgagagatactggaggagtctctgaag
atgctgggtgatgaggagtcgacagacagcgagctgagatccaagttcagccaacgctgg
aacagaactccctctggagacctctacaaaccactcagagcagaggggggtaacttccgc
agcgtgctggacaaggcagtgcaggcggaccaggtggtcagggagcgttacaatacacac
tgtgagatgatcgctctgctctgtaaaccagaggctgaactcaccgctgccataccatca
gccaaccctgtgaagacactgcagggcagcgaggtggtgagtgtgttgcgttcccagctg
gcccagctagaggaagtgaagaaggagagggaggggttggaggtggagattaagggcgtg
gcctttgacatgtcctccagcttcctgacggctctggctcaggacggggccatcaatgag
gaggcactgtcaatgagccagctggaccaatcatatggcagctacagccagagggttcag
gccagcctccgttctcaggaagaactgctaggcaaagtgcaggcgtctcaccaggagttc
tccaagctgaagcagtccaactcggaggctaatgatcgtgaggaggtgttgaagaagctg
gcctcagcccacgacagctacgtagagatcaccagcaacctccgagagggcaccaagttc
tacaacgacctcacagagatcctgctgaagttccagaacaagtgcagtgacatcatcttc
gcgcgcaagaccgaacgggacgaactgctcaagtgtgtggtggtgatgtcgtctctttcc
cgttcccagcagccccaggtgaaggcccagccgccccagcggccccctccccctgccttc
accccccaggccgcctccgcacctggtaaccctccagacaaccagcctcaaccaggaaac
cccccacccatggcccctccctcacaggcacagggaccgccttaccccacctaccaggga
tacccagggtatgcctaccagatgcccatgggttataacccgtatgcagcgtacagccag
tacaacatgccccccgctatgcagcctaacatgcagccctacgtcccctatcagcaggcc
ccagcacccggacaggggggcttccccggcaccccccccacacagcagcacccctacaac
ctaccaacaagcagcccgcacacccaccacaatcaaccatga
DBGET
integrated database retrieval system
