Oncorhynchus nerka (sockeye salmon): 115121341
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Entry
115121341 CDS
T07952
Name
(RefSeq) retinoic acid receptor gamma-A-like isoform X1
KO
K08529
retinoic acid receptor gamma
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115121341
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
one03310
]
115121341
Transcription factors [BR:
one03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
115121341
Nuclear receptors [BR:
one03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
115121341
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
115121341
NCBI-ProteinID:
XP_029506259
LinkDB
All DBs
Position
Unknown
AA seq
505 aa
AA seq
DB search
MFDCMEALGMGPRQLYDVTSRGACMLRKASPFFAGLDPFAWTGSASVQSVETQSTSSEEM
VPSSPSPPPPPRIYKPCFVCQDKSSGYHYGVSSCEGCKGFFRRSIQKNMVYTCHRDKNCQ
INKVTRNRCQYCRLQKCFEVGMSKEGERPVRNDRNKKKKDVKEELVLPESYELSGELEEL
VNKVSKAHQDTFPSLLQLGKYHTNSSAEQRVQLDLGLWDKFSELSTKCIIKIVEFAKRLP
GFTTLTIADQITLLKSACLDILMLRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTD
LVFAFAGQLLPLEMDDTETGLLSAISLISGDRMDLEEPQKVDKLQEPLLEALKIYARRRR
PNKPHMFPRMLMKITDLRGISTKGAERAITLKMEIPGPMPPLIREMLENPEAFEDQTESS
GESSPPPAPPPIPPASSKPPTTMKTEAEDEEDSWGTEPSPEEEDEDDYDDGEEEDRDRGS
DSEGESWALEGSSEGARKNHAGRAQ
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgtttgactgtatggaagctctggggatgggcccacgccagctatatgatgtcaccagc
cggggtgcgtgcatgctgcggaaggcgagccccttcttcgcagggctggaccccttcgct
tggaccggcagtgccagcgttcaatcggtggagacccagagcaccagctctgaggagatg
gtccccagctctccctctccacctcccccaccacgcatctacaaaccctgcttcgtctgc
caggacaagtcctctggataccattacggagtcagctcatgtgagggctgcaagggtttc
ttccgacgcagtatccagaagaacatggtgtacacctgccaccgagacaagaactgccag
atcaacaaggtcaccaggaaccgctgccagtactgccgactgcagaagtgctttgaggtc
ggcatgtccaaggaaggtgagagaccggtgcgtaatgacaggaacaagaagaagaaagac
gtgaaggaggagttggtgttgccagagagttatgagttgagtggagaactggaggagctg
gtcaacaaagtcagcaaagcccaccaagacaccttcccctcactgctgcagctgggcaaa
taccacaccaactccagtgcagagcagcgcgtgcagctggacctggggctgtgggataag
ttcagtgagctttccaccaagtgcatcatcaagatcgtggagtttgccaagcgcctcccc
ggcttcaccaccctcaccatcgctgaccagatcaccctcctcaaatcagcctgcctggat
atcctgatgttgaggatctgcacccgctacactccagagcaggacaccatgaccttctca
gacgggctgaccctgaaccggacccagatgcacaacgcaggcttcggcccgctcacagac
ctggtgtttgcctttgctggccagctgctgcctctggagatggacgacacagagacgggc
ctcctcagcgccatctccctcatctctggagaccgtatggacctggaagagccccagaag
gtggacaagttgcaggagcctctcctggaggcgctgaagatctacgcacgtcgcagacgc
cccaacaaaccccacatgttcccccgcatgctgatgaagatcactgacctcagaggcatc
agcactaagggggcagagagagccatcactctgaagatggagatcccaggccccatgcct
cctctgatcagggagatgttagagaacccagaagcattcgaggaccaaacagagagcagc
ggagagagctccccaccgcctgcccctccacccattccaccagcctcctccaagcccccc
accaccatgaagactgaggctgaggacgaggaggacagctgggggacagagccttcccca
gaggaggaagatgaggatgactatgatgatggggaggaggaggatcgggacaggggctcg
gacagcgagggggaatcctgggctctggagggtagcagcgaaggggctaggaagaaccat
gccgggagggcgcagtga
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