Oncorhynchus nerka (sockeye salmon): 115121355
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Entry
115121355 CDS
T07952
Name
(RefSeq) occludin-like
KO
K06088
occludin
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03272
Virion - Hepatitis viruses
one04514
Cell adhesion molecules
one04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
115121355
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
115121355
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
115121355
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
one01009
]
115121355
Protein phosphatases and associated proteins [BR:
one01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
115121355
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Occludin_ELL
MARVEL
YldA
SUR7
NnrU
Swi5
DUF2381
GreA_GreB_N
Motif
Other DBs
NCBI-GeneID:
115121355
NCBI-ProteinID:
XP_029506281
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Position
LG4:12477723..12488560
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AA seq
499 aa
AA seq
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MSSKHNGSPPPYESDGYHEPPQPAYSYYPDDEFQHFYKWTSPPGIIKLMAIIVIVLCVAI
FACVASTLAWDSQGAMSGFGGYGGSSYGGSSYGGGGYSGSFGGGAYGAGNNYGYGGLGGN
YNDPRTGKGFIIAMAAFSFITALVIFIIVVSRHGLSESRRFYLAVVIICAILALLMLIAT
IVYLVAVNPMAQSTGSIYGSQLAGLCAQYQGPQASGMLVNQYLYHYCVVEPQEAIAIVFG
FLVMAALIIMMVFALKTRQKIRNYGKSNVLWRKVKVIDEEAPPQDVEAWVNNVSGFPDEG
VVLTDYPEKFGGSRSHLDDTSTNYDKPPYNDSPAPPVVCDFPVHSSAPYSSGSEMASSAA
GKPKKRRAGRPRRTDGQDTDYASSGDELDDDNDFDSEFPTIANEQERVDYKREFDRDHQE
YKDLQGELDIINKSLSEVDRELDELQEGSPQFLDAMEKYNRLKDIKKSADYQLKKRRCKY
LKAKLSHIKRMVADYDRRA
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccaagcacaacgggagtccgcctccctatgagtcagatggatatcatgagcca
ccccagccggcatactcctactaccccgacgatgagttccagcacttctacaaatggacg
tctcccccgggcatcatcaagctgatggccatcatcgtcattgtcctctgtgtggccata
ttcgcctgtgtggcctctacgctggcctgggacagccagggggccatgtctggcttcggt
ggttacgggggcagctcgtatgggggcagctcgtacggaggcggtggttactccggtagc
tttggtggtggtgcctatggtgccggtaacaactatggctacggtggactcggagggaac
tacaatgaccctcgcactggcaaaggattcatcattgccatggcagcattcagcttcatc
acggcccttgtcattttcatcattgtggtgtcgaggcatggcctgtcggagtctagaagg
ttctacctagctgtggtgatcatctgtgctatcctggccctgctgatgctcatagcgact
atagtgtacctggtggcggtgaatcccatggctcaatctacagggtcgatctatgggagc
cagctggcaggcctgtgtgcccagtaccagggaccccaggcttcaggaatgttggtcaac
cagtatctctaccattactgtgtggtggagcctcaggaggccatagcgatagtgtttggc
ttcctggtgatggcggctctgatcatcatgatggtgtttgccttaaagacgcgccagaaa
atcaggaattatggcaagtccaacgtcctgtggaggaaggtgaaggtcatcgacgaggag
gccccgccccaggacgtggaggcatgggtgaacaatgtgtcaggttttcctgatgaaggt
gtggtgctgaccgactacccagagaagtttggaggatccaggagtcacctggatgacacc
agcaccaactacgacaaacctccctacaatgacagcccagctcctccagtagtatgtgac
ttccctgtgcacagtagcgccccctacagcagtggctcagagatggccagctcagcagca
gggaagcccaagaagagacgggccggtcgtcctcgccgtactgatggacaggatacagac
tacgcttcctctggggacgagctggacgacgacaatgacttcgacagtgagttccccacc
attgccaatgagcaggaacgtgtggactacaagcgtgagtttgaccgggatcaccaggag
tacaaggacctgcagggagagctggacatcatcaacaagagcctgtcagaggtggacaga
gagctggatgagctgcaggagggaagcccccaattcctggatgctatggaaaagtacaac
aggctaaaggacataaagaagtcagcagattaccagttgaagaagcgcaggtgtaaatac
ctgaaggccaaactgtcccacatcaagaggatggtcgctgactacgatcgcagggcctga
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