Oncorhynchus nerka (sockeye salmon): 115121390
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Entry
115121390 CDS
T07952
Name
(RefSeq) sortilin-like isoform X1
KO
K12388
sortilin
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
115121390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
BNR_6
DUF7859
Motif
Other DBs
NCBI-GeneID:
115121390
NCBI-ProteinID:
XP_029506331
LinkDB
All DBs
Position
Unknown
AA seq
818 aa
AA seq
DB search
MGVLAHCVIIFIFQHLTSSYDFKEGLYNSGQYEFVKDPSLNIEKRSPDLDPFDSESSDHI
RSRRSADQGDCNRLQGFDTKLTNNTQTYSFNDLSGSVSLAWVGDATGVILALTTFQVPFF
MLRFGQSKLYRSENYGKSFQDVTNLINNTFIRTEFGIAIGPENSGKVILTGDVSGSLGSR
IFISRDFGNSFEQQDLPFNPLMQIIYNPIDANVLLVISNTNELWLSEDFGEKWRKIHDMV
CLAKWGMDSNLFFTTNLNGSCNERGMLDLRKTADYGKTIKTVAIKIFSFGLGGKFLFASV
MTGTGTLRVIHVSTNQGEDWNMAQLPPVGHEEFYSILSANDDMVFMHVDEPGDTGYGSIY
VSDDRGTVYSKSLERHLYTTTGGDTDFTNVTSLRGVFITSILAEDGSVQSVVSFDQGGEW
VPLQKPANTKCDSTAKDPDKCSLHIHAAYSTAMKLNVPMLPLSEPNAVGLIMAHGSVGDA
ISVMKPDVFVSDDGGYTWLQALEGPHHYAILDSGGLLVAVEHSAQPIKDIKFSTDEGQCW
HVHQFTSDPIHFTGLASEPGARSMNVSVWGYRDSLLSQYWVSVTIDFRELLTRDCEDQDY
VQWLAHSDDISDPNDGCMLGYKEKFLRLRKASVCWNGRDYEVNKQPAPCLCTLDDFLCDF
GYYRKENSSECVEQPDLKGHVLEFCLQGKKELLQTRGYRKIPGDKCEGGTQPERKEIDLS
KRCVNDLLGPQELLTDGHLSSSAPIVVTVLIIILLSVVAGFLFVKKYVCGGRFLVHRYSV
LQQHAEAQGDGVDEPLDSNHTRASNKTGLHDSDEDLLE
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atgggagttctggcgcactgtgttattatttttatattccagcatttgacgtcatcttat
gattttaaagaaggactatataacagcggtcagtatgaatttgtgaaagatcccagtttg
aatatcgaaaagagatcaccagatttagatccgtttgattctgaatcatccgaccacatt
aggagcagaagaagtgcggatcaaggagactgtaaccgtctccagggattcgacaccaag
ttgactaacaacacccaaacctattccttcaatgacctgagtgggtccgtgtcactggcc
tgggttggagacgccaccggggtcatcctggctctgacaacattccaggtgccgttcttc
atgttgcgattcggtcagtctaaactctatcgaagtgagaactacgggaagtcgttccag
gatgtcacaaacctcatcaacaacactttcatccggacagagttcggcatcgccatcgga
ccagagaactctgggaaggtgatcctgacaggtgatgtgtctggcagcctgggatctcgt
atctttatctccagagactttgggaacagctttgagcagcaggaccttcctttcaacccc
ctgatgcagatcatatacaaccccatagacgccaacgttctcctggtcatcagcaacact
aatgaactctggctgtctgaggactttggcgagaagtggaggaagatccacgacatggtg
tgtctggccaaatgggggatggacagtaacctattctttaccaccaacctcaatggatcc
tgcaatgaaagggggatgctagacttgagaaagactgcagactacgggaagaccatcaag
actgttgccattaaaatcttctctttcggcctggggggaaagttcctgtttgcttctgtt
atgactggaactggcactctgagggtgatccatgtgtcgactaaccagggggaggattgg
aacatggctcagctgcctccggttggccacgaggagttctattctatcttgtcagccaat
gacgacatggtgttcatgcacgtggatgaaccaggagacacaggctacggcagcatctac
gtgtcagacgacaggggtacggtgtactctaagtctctggagcgtcacctctacaccacc
acagggggagacactgacttcaccaacgttacctctctacgaggggtcttcatcaccagt
atactggcagaggacggctcggtgcagtccgtggtgtccttcgaccagggaggggaatgg
gtgcccctgcagaagcctgccaacaccaagtgtgactccacagccaaagaccccgacaag
tgcagtctccacatccacgcagcttacagcacggctatgaagctgaacgtccccatgctg
cctctcagtgaaccaaacgctgtaggactcatcatggcgcacgggagtgtgggcgatgcc
atctctgtgatgaagcctgacgtattcgtgtcagatgatggaggttacacctggctacag
gccctggagggacctcatcactatgccatcctggactctggtggactcctggtggccgtg
gagcactctgctcagcccatcaaagacatcaagttttccacagacgagggccagtgctgg
cacgttcaccagttcactagcgatcccatccacttcacagggctagcgtcggagccgggg
gcgaggtctatgaacgtcagcgtctggggctacagagactctctgctcagtcagtactgg
gtatcagtcaccatcgacttcagagagctgctcactagagactgtgaggaccaagactac
gtgcagtggctggcgcactctgatgacatcagcgaccctaacgacggctgtatgctgggt
tacaaggagaagttcctgcgtctgaggaaggcctctgtctgctggaacggacgggactac
gaggtcaacaagcaacccgccccttgtctctgcaccctggatgactttctgtgtgacttt
gggtactatcgtaaagagaacagctccgagtgtgtggagcagcctgacctgaagggccac
gttctggagttctgtctgcaaggcaagaaggagctgctgcagaccagaggctataggaag
atccctggggataagtgtgagggaggaacacagccggagagaaaagagatcgacctcagt
aagaggtgtgtcaatgacctactgggacctcaggaactactgacggacggccatctgtcc
agctcagcgcccatcgtagtgacggttctgatcattatcctgctcagtgtcgtggccggg
ttcctctttgtcaagaagtacgtctgcggtggaaggttcctggtacacaggtactctgtc
ctacagcagcatgctgaggcccagggagacggggtagacgagccattagacagcaaccac
actcgggctagcaacaagaccggcttacacgattcagacgaggatcttctggagtaa
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