Oncorhynchus nerka (sockeye salmon): 115121488
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Entry
115121488 CDS
T07952
Symbol
ddx52
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
one03009
]
115121488 (ddx52)
Enzymes [BR:
one01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
115121488 (ddx52)
Ribosome biogenesis [BR:
one03009
]
Eukaryotic type
90S particles
Helicases
115121488 (ddx52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
ResIII
Motif
Other DBs
NCBI-GeneID:
115121488
NCBI-ProteinID:
XP_029506446
LinkDB
All DBs
Position
Unknown
AA seq
418 aa
AA seq
DB search
MDAFDLFRKLGAGAKFDFKRFGKDAERFKVVRSQEKDVSDHYGIDFFGTGTTHGNQEQRA
EEKRDEEGEVDAAAGKRKRQDEEKTAKKKKKDTQAEGSIWRLVFYSAAEVECEETEGILW
TSSADRKSKGLKEGRDRDKTSMKRLQHLHQEKVNRVRMQHRINVHGCDVPDPVCTFSELQ
SEYDLNPRVLQNLSAAGLTIPTPIQNGTQGLSGRELLACAPTGSGKTLAFCLPLLTHLKQ
PANLGIRALVISPTRELASQTHRELVRLSEGVGFRVHILDKASMAARKYVPSSHKKSDIL
ISTPNRLVFLLKQDAIDLSSVEWLVVDESDKLFEDGRSGFREQLAAVFQACSSPRVRRAL
YSATCAPDVEQWCRLNLDNLVSVNIGHRNSAVETVEQELLFVGTENGKLLAVRDIIKK
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggacgccttcgacttgtttcgtaaactcggagccggagcgaaatttgatttcaagagg
tttggtaaagatgccgaacgatttaaggtggtgagatctcaagagaaagatgtatctgac
cactatgggatcgactttttcgggaccggaacaacccacggcaaccaggagcagagagcg
gaggagaagcgagacgaggagggagaggtagatgctgctgcagggaaaaggaaacgacag
gatgaggagaagactgcaaagaagaaaaagaaagatactcaggctgaaggtagtatttgg
aggcttgtgttctacagtgcggctgaagtggagtgtgaggagaccgagggcatcctgtgg
acctcctctgcagacaggaagtctaaaggcttgaaggaggggagggacagagacaagaca
tccatgaagagactccaacacctccaccaagagaaggtgaaccgtgtccgtatgcaacat
cgtatcaacgtgcatggctgtgacgtgcctgacccggtgtgcaccttctccgagctgcag
tccgagtacgacctgaacccacgcgtcctccagaacctgtccgcagctggactcaccata
cccacgcccatccagaatggaacacagggactgagtggtcgtgagttgttggcgtgtgct
ccgacaggttcggggaagactctagcgttctgtctccctctcctgacacacctgaaacag
cctgctaacctcggcatcagagctctggtcatctctcccaccagggaactggccagccag
acccacagggagttggtgcgtctgtcggagggcgtcgggttcagagttcacatactagac
aaggcctccatggcagccaggaaatacgttcccagctctcacaagaaatccgatattctg
atcagtacccccaatagactggtgttcctcctgaagcaggatgctatagacctcagcagt
gtggaatggttggtggtggatgagagcgataagctgtttgaggatggtcgtagtggcttc
agagagcagctagcagcagtgttccaggcgtgttcctctccgcgggtcagacgagcgctc
tacagtgctacctgtgctccagacgtggaacagtggtgtcgcctcaacctcgacaacctg
gtctctgtcaacattggacacaggaactctgcagtagagacagtagaacaggagctgctg
tttgttggaacggagaacgggaagttattggccgtgagggacatcatcaaaaag
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