Oncorhynchus nerka (sockeye salmon): 115121503
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Entry
115121503 CDS
T07952
Symbol
srek1
Name
(RefSeq) splicing regulatory glutamine/lysine-rich protein 1 isoform X1
KO
K13165
splicing regulatory glutamine/lysine-rich protein 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
one03041
]
115121503 (srek1)
Spliceosome [BR:
one03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
115121503 (srek1)
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RBD_DEAH11
Motif
Other DBs
NCBI-GeneID:
115121503
NCBI-ProteinID:
XP_029506465
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Position
LG4:complement(13074661..13087199)
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AA seq
533 aa
AA seq
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MSGIPGTAVIQITNLSSAVSSEQMRTLFGFLGDVEELRLYPPDNAPLPFSSKVCYIKYRE
PSSVGVAQHLTNTVFIDRALIVVPCAEGKIPEEAKALSLLAPAAPPAVPAVPSLMPGAGL
LPLPTSAPIQTLSVPIVSLAALPAALDPAVSALAVTGAGGVSSSAQPPLMGNVDPSKVNE
IRRTVYVGNLNSQTTTAEQLLEFFKQVGDVKFVRMAGDETQPTRFAFVEFADQDSVSRAL
TFNGVMFGDRPLKINHSNNAIVKPPELTPQAAAKELEDVMKRVREAQSTIAAIIVEPEEV
KKRSSSHSRRSRRSRTRSRSHSRSRTRRKRSHSRHRSRLSQRSRPKVSESHVSRGIHKRL
SRSRSRDRRKEREQRTRGKEDISRVIEDRRQKEKKAKTPPKSYSASQRSRSTSRGHRRKS
RDRSRSPRRKARSPSPKRGRKDEKREKARDGSREKRESSNSGKKSSRDKEKIELKAKPMK
VERDYDRKEKDYQSDREGSATPSEGLTSPCVQHNGSYNTNTEDDAASLADSTE
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgagtggaattccaggcaccgctgtcattcaaatcaccaatctgtcgtctgccgtgagt
agtgagcagatgcgcactctcttcggctttcttggggacgtcgaggagttacgtctttac
cccccggacaatgcaccactccccttctcgtccaaagtatgttacataaagtatcgagag
ccttccagtgttggcgtggcgcaacatttaaccaacactgtatttattgacagagctttg
atcgtagtcccatgtgcagaagggaagatcccagaagaagccaaggccttgtctctcttg
gcacctgctgccccccctgctgttcctgctgtacccagcctgatgccaggcgccggcctg
ctgccccttcccacctcggcccccatacagactctgagcgtccctattgtgagcctggcg
gcattgccagctgccctggaccctgcagtgtcggccctggctgtgactggagcaggtggg
gtgtcgtcctccgcccagccccccctcatggggaacgtggatccctccaaggtgaacgag
atcagaaggactgtctacgttggcaacctcaactcgcagaccactactgcagagcagctg
ctggaattctttaagcaggtgggcgacgtaaagtttgtgcgcatggcgggggacgagacg
cagcccacacgcttcgccttcgtggagtttgccgaccaggattcagtgtccagagcgctg
acctttaacggagtcatgttcggagacagacccttgaagattaatcattccaacaacgcc
attgtgaagcccccagagctgacccctcaggctgcagccaaggagctggaggacgtaatg
aagagggtcagagaggcccagtccaccattgccgccatcatagtagagccagaggaggtg
aagaaacgctcatccagtcactcccgacgttccaggagatccagaacacggtcacgatcg
cattcccgctcgagaacgaggaggaagcggtcccattctaggcacagaagcaggctctct
cagaggtcgcggcccaaggtcagcgagtcccacgtctctcgggggatccacaagagactt
tcgcgctccagatcacgggacaggcggaaagagagggagcagaggacgagaggaaaggag
gatatatctcgggttatagaggacaggaggcagaaggagaaaaaggctaaaacacctcca
aaaagctacagtgcatcccaaaggtccaggagcacgagcaggggccacagaaggaagagc
agggatcgttctaggagtcccagaaggaaagccaggtctccctcaccaaagagagggagg
aaagacgagaagagggagaaagcaagggatggcagcagggaaaagagggagagttccaac
tccgggaagaagagcagcagagataaagagaagattgagctcaaggccaaacctatgaag
gtggaaagggactacgacaggaaggagaaggactaccagagtgacagggaggggtcggcc
acaccaagcgagggtttgacatcaccctgcgtccagcacaacggcagctacaacacaaac
acagaggatgacgctgcctcgctcgccgacagcactgagtga
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