Oncorhynchus nerka (sockeye salmon): 115121526
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Entry
115121526 CDS
T07952
Symbol
erbin
Name
(RefSeq) erbin isoform X1
KO
K12796
erbb2-interacting protein
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
one00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
115121526 (erbin)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_14
LRR_4
PDZ
LRR_LRWD1
LRR_5
LRR_NXF1-5
PDZ_2
PDZ_6
LRR_At5g56370
LRR_9
Motif
Other DBs
NCBI-GeneID:
115121526
NCBI-ProteinID:
XP_029506492
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All DBs
Position
LG4:complement(13098944..13214714)
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AA seq
1428 aa
AA seq
DB search
MSSKRNLFVRLVPCRCLRGEEETVTSLDYSHCSLEAVPKEIFSFEKTLEELYLDANQIEE
LPKQLFNCQMLHRLSMPDNDLTVLPAAIANLINLKELDVSKNSIQEFPENIKNCKVLAIV
EASVNPISKLPEGFTQLLSLTQLYLNDAFLEFLPASFGRLTKLQILELRENQLKMLPKSM
HKLTQLERLDLGSNEFTEVPEVLEQLTGIKELWIDGNRLTFLPGMLGTLKQLSYLDVSKN
NLEMVDEQICGCESLQDLLLSNNALTQLPGSIGSLKKLTALKVDENQLMYLPDSVGGLAA
LDELDCSFNEIEALPSSIGQCVSIRTFAADHNFLTQLPPEMGSWKSATVLFLHSNKLESL
PEEMGDMTKLKVINLSDNKLRNLPYSFTKLNQMTAMWLSENQSKPLIPLQKEEDPETHKT
VLTNYMFPQQTRTEDCIPNSDSESFNPSLWEEQRKQRAQVAFECDEDKDERETPPREGNL
KRYPTPYPDELKNMVKTAQSIAHRLKEDESGDESGKDAKPNERIHVGVQDVGVKVIEAPR
ANGKPVEMEPKAPVCVQDSTVPLETSESYTSQKTSLRTSDNTKTMNHEDTLESFSLQDSE
ELSSEEEMKMAEMRPPLIEISINQPKVVALSKDKKDDGKDADSLLDETVANSNQNNSNCS
SPSRMSDSVSLTTDSSQDNSLCTPEREAKMPFLPKSRQEDENMNQQKVSTPLLQNGNGPD
TTLQALLKNQQSYESKPEKIVGDYDLSIEERLAFIKKGINNGMGDGYTKWDQINMNVAKL
PLQPDNMGVQLDDCQNGTSTKEAFHHLPPPYNNENSTAPITDHLENGNQMGDHFNGRSSE
GLAVSPMRLDSATSVVRTASAGVTASNDMSLSRSTEELSPVAKAQSITNIETGEMKLYSL
DTEGGSYEGGVVGRMAGALPGAQGQSIVRSKSASLLNDQPFQVYPGSSASSSDLLSSSSK
PPVSTGRYPVPSGMAMGPPPQYNVQYTSSALPKEGLWTHRTPVPPDQGYLPPPQHSLANT
NYSNRNQAPPYPHQAQQRGLPMGPKPPGDMWAKERHLPPGGQPRSSTLQRQSSSSSTASM
GDPRRMQVPEGDYMTYRDIHTLGRGPLAIAQTVQRPLSARTYSIDGPCAPRPHTTRPQPH
ELPERTMSVSDFNYQHVSPSKRPNARVKSEHSLLDGPGGLGAGARVPVDWRDQVMRHIEA
KKMEKYALSLSYNSNYAPLSSSHYGSSRDVHHTGSQGSLVFSAATDGRPYGAQGICDDVL
GPQGQQGYTMDTLRKVPLMNGQMGGPVRGQMTSCQAPMARHPSREQLIDYLMLKVSHGQQ
PQGPPPPRATQDTLHQEMRVKVEKNPELGFSISGGVGGRGNPFRPDDNGIFVTRVQPEGP
VSKILQPGDKILQANGYSFVNIDHGNAVALLKTFPTTVDMIIIREVTA
NT seq
4287 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagcaagcggaacctgtttgtgcggctggtgccatgccgctgcctgcggggggag
gaggagacggtgacgtcactggactactcccactgcagcctggaggcagtgcctaaggag
atcttcagcttcgagaagaccctggaggagctctatctggacgccaaccagattgaggag
ctgccaaaacaactgttcaactgccagatgctccaccggctgagcatgccagacaacgac
ctcacggtgctgcccgcggccatcgccaacctcatcaatctcaaggagctggacgtcagc
aagaacagtatccaggagtttccagaaaatatcaagaactgcaaagtcctggctattgtt
gaagcaagtgtgaatcccatctccaagctcccagagggtttcacccagctcctcagcctg
acacagctctacctgaacgacgccttcctcgagttcctaccagccagctttggcaggttg
actaaactgcaaatcctagagctgagagagaaccagttaaagatgttgccaaaaagcatg
cacaagctcacccagctggagagattggacttggggagtaacgagttcactgaagtgcct
gaggtattggagcagctcactggaatcaaagagttgtggattgatggaaacagactgaca
ttcctaccagggatgctaggcactctgaagcagctgtcctaccttgacgtctccaagaac
aacctggagatggtggacgagcagatttgtggctgtgagagcctgcaggacctactgctt
tctaacaatgcactcacacagctgcccggatccataggctccttgaagaaactaaccgcc
ctaaaagtggacgagaaccagctcatgtatctgccagactccgtcggaggtctggcagcc
ctggatgagcttgactgtagttttaacgagatcgaggctctgccctcctccattggacag
tgtgtcagcatacgcacttttgccgctgaccacaacttcctcacacagctgcccccagag
atgggcagctggaagagtgccactgtgctgttcctgcactccaacaagctggagtctcta
cctgaggagatgggagacatgaccaagctcaaggtcatcaatctcagcgacaacaaattg
aggaaccttccctacagcttcaccaagcttaaccagatgactgctatgtggctgtctgag
aaccagtcgaagcctctcatccctctgcagaaggaggaggatccagagacccacaagacg
gttctcaccaactacatgttcccccagcagaccaggacagaggactgcatccctaactct
gacagtgagagcttcaacccctctttgtgggaggagcagaggaagcagcgggcccaggtg
gccttcgagtgtgacgaggacaaggatgagagggagacgcctccgcgggagggcaacctg
aagcgctacccgacaccgtacccagacgagctgaagaacatggtgaagacggcccagtct
atcgctcacaggctgaaggaggacgagtcgggcgacgagtcggggaaggatgccaaacct
aatgagcggatccatgtgggagtgcaggacgtgggagtcaaggtgatcgaggctccccgc
gccaatggcaagccagtagagatggagcccaaagcacctgtctgtgtccaggactccaca
gtacccctggagacctctgaatcctacacctcccagaagacctcactccggacctcggac
aataccaagaccatgaaccacgaggacaccctggagtctttttctctgcaggattctgag
gagctttcatctgaggaggagatgaagatggcggagatgagacctcctctcattgagatc
tccatcaaccagcccaaagtggtggcacttagtaaagacaaaaaagatgacggcaaagac
gctgactcgttgctggacgagacagtggccaacagcaatcagaacaacagcaactgttcg
tccccgtcacgcatgtcagactcggtgtctctgaccacggacagcagtcaggacaactcc
ctgtgcacccccgagagagaggccaagatgcccttcctacccaagagcaggcaagaggat
gagaacatgaatcagcagaaggtaagcacccctctcctccagaacggcaacggcccagac
actaccctgcaggccctcctgaagaaccagcagtcctacgagtccaagccagagaagatt
gtgggggactacgacctgtccattgaggagaggctggccttcatcaagaagggcatcaac
aacggcatgggcgacggctacaccaagtgggaccagatcaacatgaacgtggctaagctg
ccgctgcagccggataacatgggggtccaactggacgactgtcagaatggcacgagcacc
aaggaggcctttcaccacttgcctccgccgtataacaacgaaaactctacggcacccatt
acagaccacttggagaacggcaaccagatgggcgaccactttaacggccgctccagcgag
ggattggccgtgtcgcccatgaggttagactctgccacgtcggtggtgcggactgcttcg
gcgggcgtgacggccagcaatgacatgtcgctgtctcgcagcacagaggagctgtccccg
gtggccaaggctcagagcatcaccaacatcgagacaggggagatgaagctgtactccttg
gacactgaggggggctcctacgagggtggagtagtgggcaggatggccggagccttaccg
ggggcccagggtcaaagcatcgtccgcagcaagtcagcctccctgctcaatgaccagccc
ttccaggtctaccccggctcctcagcctcttcctccgacctgctctccagctcctcaaag
cctcctgtcagcaccggccgctaccccgtcccctcaggcatggccatgggcccgccgcct
cagtacaacgtccagtacaccagcagcgccttgcccaaagaaggcctgtggacccatagg
acccccgtcccccccgaccagggctacctccctccaccccagcactctctggccaacacc
aactactccaaccgcaaccaggcccctccatatccccaccaggcccagcagagaggcctg
cccatggggcccaagccgcctggtgacatgtgggctaaggagagacacctgccccccggt
ggtcagccacggagcagcaccctgcagaggcagagcagcagttcctccacggcctctatg
ggggacccccggcgcatgcaggttcccgagggagactacatgacgtacagggacatccac
accctgggccgggggccgctggccatagcccagaccgtgcagaggcctctgtcggcccgc
acctacagcatcgatgggccctgtgcccccaggcctcacaccaccaggccacagccccat
gagctgcccgagaggaccatgtcggtcagcgacttcaactaccagcacgtcagccccagt
aaaaggcccaacgccagggtgaagtctgagcactcgctgttggacgggccaggaggactg
ggagcaggagcaagggtaccagtggattggagagaccaggtgatgcgccacatcgaggcc
aagaagatggaaaagtacgccctgtctctgtcctataattccaattatgccccgctgagc
tcctctcactacggtagctctagggacgtgcaccacacaggcagccaaggctctctggtc
tttagtgctgccacagacggacggccctacggagcccagggcatctgtgatgatgtgtta
ggtcctcaaggacaacagggctacaccatggacaccctccgaaaagtgcctttaatgaat
ggtcagatgggcggtccagtgcgaggccagatgacgtcgtgccaggcgcccatggcccgc
cacccctccagagagcagctcatcgactacctgatgcttaaggtctcccatggccagcag
ccccagggaccccctccgccacgggccactcaagacacactgcaccaggagatgcgtgtg
aaagtggagaagaaccctgagctagggttcagtatatcaggaggagtgggaggacgggga
aacccctttcgaccggacgataatggcatctttgtgacgagggtccagcctgagggacct
gtctcaaagatcctccagcctggagacaagatcctccaggcgaacggatacagctttgtg
aacattgaccacgggaacgccgtagccctgctgaagacgtttcccaccactgtggatatg
atcatcatccgagaggtgacagcgtag
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