Oncorhynchus nerka (sockeye salmon): 115121579
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Entry
115121579 CDS
T07952
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 12-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
one04054
]
115121579
Pattern recognition receptors [BR:
one04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
115121579
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
NACHT
FISNA
PYRIN
PRY
NOD2_WH
LRR_6
SPRY
Motif
Other DBs
NCBI-GeneID:
115121579
NCBI-ProteinID:
XP_029506549
LinkDB
All DBs
Position
Unknown
AA seq
1131 aa
AA seq
DB search
MATSVPDLLLAILEELVGNDLKTFHWYLAQSVPDGFPLIPKGHLENADRQDTVDTMVNTY
GHDVAMKISLEILRKMNQKDLSKTLTVDQQEAEVEVAAASIRVPDSPVYITCTAQTGGHV
VAPSLSGCHIGGPVHFNIRVNSLDEDPIVPSQASPAHFTMFPPEPVNTEDNDERIESCQK
KLKHNLHSRFVSVFEGLASHGNRKLLNQIYTELYITEAGSTEVNSEHEVRQIETASRRTA
IQETPIQCNDIFQPFLDQSIRTVLTKGVAGIGKTVSVQKFILDWADGKANQNLQLIFPLS
FRELNLVRKKRCSLIELLNGFFTETKETEISNYDNYQVLFVFDGLDECRLPLDFQNNDIL
FKITESTSVDVLLTNLIKGNLLPSAQLWVTTRPAAANQIPPECVDKVTEVRGFNDPQKEE
YFRNRISDENLASRIITHIKTSRSLYIMCHIPVFCWISAIVLERKLEKAGSGEMPKTLTQ
MYSHFLAFQEKDMDLRLQGRGTPDPDWMRKSIMSLGKLAFQQLEKGNLIFYEEDLRECGI
HIGQASVYSGVCTEIFSEELTLCQGKVFCFVHLSIQEFLAALYVFLTFINDNVNLLAKQQ
SFLRRFPFGNSSSTSFYKAAVDKALQSENGHLDLFLRFLLGLSLESNQILLRGLLTQKTS
RSQTNKESVKYVKEKIKENPSPERCINLFHCLNELHDHSLVEEIQSYLGSGTLSRAKLSP
AQWSALVFVLLTSEEELDEFELKKYSRSEEGLLRLLPVVKASRTALLNRCKLTERCCEAL
ASALSSHSSHQRELDLSHNDLQDSGVKLLSAGLASPQCKLETLRLRRCKLTERCCKALAS
ALSSNSSHMRELDLSDNNLQDSGVMLLSAGLGSPHCKLQVVRLSLCSVTEEGCALLASSL
NSNPSHLRELDLSYNYPGDSGVKLLSAVLEDPHCKLEKLSVECCAEFRIRPGPQRYACEL
TLDPNTAHKELSLSEENRKVTRGKEQPFPDHPERFDYWRQVLCREGLDGRCYWEAECSGR
ALMGVSYRGISRRGEGHDCWLGRNAVSWSLNCSNDSYTAWHNDKSTGITTPSLSNRVGVY
LDWPAGTLSFYSVSSNTLTHLHTFHSTFTEPLYPGFRLGWVDSSVSLCQVE
NT seq
3396 nt
NT seq
+upstream
nt +downstream
nt
atggcgacatctgttcctgacctgctactggctattctagaggagctggtaggaaacgat
ctgaagacatttcactggtacctggctcagagtgtaccagatggctttcctcttatcccc
aagggccatctggagaacgctgacaggcaggacaccgtggatacgatggtaaacacctac
ggccacgatgtagctatgaagatctcactggagatcctgaggaagatgaaccagaaggac
ctcagcaagacgttaacagtggatcagcaagaggctgaggttgaggtagcagctgcctca
attcgggttccagactctcctgtctacatcacttgtacagctcagactggcggccatgtt
gtggccccttcgctctccggctgccacatcgggggtccagttcacttcaacatcagagtc
aactcattagacgaagatcccatagttccatctcaagcttcacctgcccattttaccatg
tttccacctgaacctgtgaatacagaagacaatgatgaacgaatcgagagttgtcaaaag
aaactcaaacacaatctgcacagtaggttcgtcagtgtgtttgagggactggccagccac
gggaacagaaaacttctcaaccagatctacacagagctctacatcacagaggctggaagt
actgaggtcaatagtgaacatgaggtgagacagattgagacggcatccagaagaacagcc
atacaagaaacaccaatccaatgcaacgacatctttcagcccttccttgatcaatccatc
agaactgtgctgacgaagggagtcgctggcatcgggaaaaccgtctcagtgcagaagttc
attctggactgggcagatggaaaagccaatcaaaatctccagttgatattccctctttca
tttcgagagctgaatttggtcagaaagaaaagatgcagtttgatcgaacttctcaatggc
ttttttacggaaacaaaagaaaccgagatatcaaactacgacaattatcaggtgctgttt
gtctttgatggtctggatgagtgtcgacttcctctagacttccagaacaatgacattctg
tttaaaataactgagtcaacctcagtggatgtgctgctaacgaacctcatcaaggggaat
ctgcttccctccgctcaactttgggtaaccacccgacctgcagcagccaatcaaatccct
cctgagtgtgttgacaaggtgacagaggtaagagggttcaatgacccacagaaggaagag
tacttcagaaatagaatcagcgatgagaacctggccagcagaatcatcacacacataaag
acatcaagaagcctctacatcatgtgccacattcccgtcttctgttggatctcagccatt
gttctggagagaaagctggagaaagcagggagtggagagatgccaaagaccctgactcag
atgtactcacacttccttgcttttcaggagaaagacatggatctcaggcttcagggaaga
ggaacacctgaccctgactggatgagaaagagcatcatgtccctgggaaaactggctttc
caacaactggagaaaggcaacctgatcttctatgaggaagacctgagagagtgtggcata
cacatcggccaggcatcggtgtactcaggagtgtgtactgagatcttcagtgaggaactg
accttatgccagggaaaggtgttctgctttgttcatctcagtattcaggagtttctggct
gccctgtatgtgtttctcacattcatcaacgacaacgtgaatctattagccaaacagcaa
tcatttctgagacgttttccattcggaaattcatcctcaaccagcttctacaaagcagca
gttgacaaggccttacagagtgagaatggacacctggacctgttcctccgcttccttctg
ggcctctcactggagtccaatcagattctcctacgaggcttgctaactcagaaaacaagt
agatcacagaccaacaaggaatcggtcaagtacgtgaaggagaagatcaaggagaatccc
tctccagagagatgcatcaatctgttccactgtctgaatgaactgcatgaccattctcta
gtggaggagatccaaagctacctgggctcaggaactctctctagggccaaactctcacct
gcacagtggtcagctctggtctttgtgttgctgacttcagaagaggagctggatgagttt
gagctgaagaaatactccagatcagaggagggtcttctgagactgctgccagtggtcaaa
gcctccagaacagccctactgaatcgatgcaaactcacagagagatgctgtgaagcgttg
gcctcagcactcagctcacactcctcacaccagagagagctggacctgagtcacaacgac
ctacaggattcaggagtgaagcttctctctgctggactggcaagtccacagtgtaaactg
gaaacgttaagactgaggcgatgcaaactcacagaaagatgctgtaaagcgttggcctca
gctctcagctcaaactcttcacacatgagagagctggacctgagtgacaacaacctgcag
gattcaggagtcatgctgctctcggcaggactgggcagtccgcactgtaaactgcaggtt
gtaaggttgtcactttgtagtgtcacagaggaaggctgtgctttgctagcctcctctctc
aattccaacccctcacacctgagagagctggacttgagctataattacccaggagactcg
ggagtgaagcttctctctgctgtactggaagatccacactgtaaacttgagaaacttagt
gtggagtgctgtgctgagttcaggatcagaccaggaccacagagatatgcctgtgaactc
acactggacccaaacacagcacacaaagaactctcgctgtctgaggagaacaggaaggtg
acgcgagggaaagagcagccgtttcctgatcacccagagagatttgactactggaggcag
gtgctgtgtcgggaaggtctggatgggcgctgctattgggaggcagagtgtagtgggagg
gccctgatgggagtatcttacagagggatcagcaggagaggagagggacatgactgctgg
ttgggacgaaacgctgtgtcctggagtctgaactgctctaatgacagttacacagcctgg
cacaacgacaagagcactggcataaccaccccctctctctctaacagagtaggagtgtat
ctggactggccggccggcactctgtccttctacagtgtctcctctaacacactgacccac
ctgcacacgttccactccacgttcactgagcccctctatccagggtttaggctaggctgg
gtggactcgtccgtgtccttgtgtcaggtggaatag
DBGET
integrated database retrieval system
