Oncorhynchus nerka (sockeye salmon): 115121631
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Entry
115121631 CDS
T07952
Name
(RefSeq) LOW QUALITY PROTEIN: rho guanine nucleotide exchange factor 28-like
KO
K21072
A-kinase anchor protein 28
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115121631
Membrane trafficking [BR:
one04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
115121631
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_16
RhoGEF
PH
SOS1_NGEF_PH
PH_13
Hid1
Motif
Other DBs
NCBI-GeneID:
115121631
NCBI-ProteinID:
XP_029506601
LinkDB
All DBs
Position
Unknown
AA seq
1548 aa
AA seq
DB search
MEGDMSAGPGKEHSLGQTDQEEEGVRGGRPRPDPQIECHLREMDERITQAVANLNYPLEW
SGKASQPREEFLPREALLHLSVRLGLLHLSRFLIGQPMGQRALTMPNEEGETPLQLAQRR
GDHSLFMALATSPFPQRSPLVGVWCVWADSTRVLRFCPGSDCLSLTFLGGPESSVLGNIL
VLREKLMDHNILRQISALRGDVQMEDSYGLDVHRSDASDGGLGRGLPVRYLTLVDSVLED
QLVLSLDDDEELPTLQTVKSQTTHPRGTQRQFSHSAAADTLASIINGRSQLDTEVDDLRA
NVSVAGITRDSSVTVSRVWDSVASECLLQATSTSLPPLGLEEQQSPSISHSPSPSPSPAD
RALARLNSNSHSYLTNQRGSPPLESPDLSPSLVALVMDSEGDEEGFLVKSSLSPISPLTS
DARSSGDDTSPDLTCTRTHSVSSDGDPPPAKDMGNQGIRHRSYSYSSPKISLLPPRFSRK
TLATPATSDLSPEQRTLSLSEQPLEKRIEEEEWDKYNIPSKVESEKYKVIRTFSFLKSRM
STTRNKNKSGCTVMVHKGCKDSAPPCLKKLQDKYAVTMVKNRTASLPQNFTVRDSPSPCP
ISTSASLPMMSQRDKRETASLLNPLSRSVPSATDRLSESPEAESDSRWCPGQSEELLQTT
ESSTSTDSSVGEDCVDASLHGDLDADALDYKAESWSLTVEHTFCKKQDKRVVKRQDVIYE
LMQTEMHHLQTLRIMAEVFRRGMREEVQLDAGAVDRVFPCLDELLLLHHNLFNAMRERRH
SSAKPHGDRNYVIVRIGDILLQQFSEDSAERMKQVYGEXCSHHTEAVTFFKELQQHNKRF
QTFIKQQSNNYLVRRREIPECILLVTQRITKYPVLLERILQYTQVDSEEHMDLSRALVLI
KEVIAAVDLMVSEFEQGQRLQDVLNRMENRSFAKLKNGHTFRKQDVLGPGQTLKHQGLLL
WKTATGRLKDVMALLLTDTLIFLQEKDQKFIFAAVDQKPPVISLQKLIVREVANEERGMF
LISASAAGPEMYEVHTSSKDERNTWMRLIREAVESCPEEEEENTNESEEERRTAEARVQK
IHKLQETLSSQDYQICSSLEEKLQIYAELSVLRGEAQEPHPEPHLLVQPNPEEVPQAAVL
LTAALREAENLRTTLSSLTFSPFSPCSPPRDPLSHPVSPACPPTPLDIPSVAEASLGDPN
TSDGESASQVLVLQSLTNNINLKVSHSVQSLTQLLYSLQAAVTIQDSFYEVQKFLLHESD
RHSPRSPRPHTPCLRGNALQEQEKQRNLEKRREEVAAAVRLQGRLHQERQRWERECQARH
SQQGELESRLEERERQCHLEAERLKQEREELEEQLEEYQQSLERLRESQRSVEKERERLE
TQQNLLQSWRHSRQRSLPVMVIPLDRCHQVCVRGDSLPGQPGGHLDNGGSVFVNEAAVTT
AMGLNNRHVHHNLQQQQRGYGDDPRAHNSLNTLLARSSHGQTLQLHPDTHTPGGTGVTGY
LYTPTVGQGSDHRRNPTVRPSSRPSGGQGSEQKPNGKTQFQTLRGTGL
NT seq
4647 nt
NT seq
+upstream
nt +downstream
nt
atggagggtgacatgagcgctggtccaggaaaggagcactctctggggcagacagaccag
gaggaggagggggttagaggtgggagacccagacctgatccacagatagagtgtcatctc
agggagatggatgagaggataacccaggccgtggctaacctgaactaccctctggagtgg
agcggcaaggccagccaacctagagaagagttcctgcccagggaggctctcctccacctc
tcagtgcgtctgggtttgctccatctctcccgctttctgattggccagcctatgggtcag
agggcactgaccatgcccaatgaggagggggaaacacccctccagctggctcagaggaga
ggagaccactccctctttatggcactcgctacttcacctttccctcagaggtctcccctt
gtcggggtgtggtgtgtatgggcagatagcacccgtgtactgaggttctgtcctggatct
gactgcctctccctcaccttcctggggggccccgagagcagtgttctgggcaacatcctg
gtcctcagagagaaactgatggaccacaacatcctcagacagatctcagcactgagaggt
gatgttcagatggaggacagttacggattggacgtccatagaagtgatgccagtgacgga
ggtctgggcagggggctgccagttagataccttactctggtggatagtgttttggaagat
cagcttgttctctctctggatgatgatgaggagcttccaacgttacaaacagtaaagtcc
cagacgacccaccccagaggaacccagagacagttctctcactctgctgctgcagacaca
ttagcctccatcatcaatggcaggagtcagctcgacacagaggtggatgacctaagggct
aatgtcagtgttgctgggataacgagggacagctctgtgactgtcagcagggtgtgggac
tcggtggcctcagagtgcctgctccaggccacctccacctctctacctccattgggacta
gaggaacaacagtccccctccatctctcactccccctctccctcaccttcccccgctgac
cgagccctcgcccgactcaacagcaactcccactcttacctaaccaatcagagagggagc
ccgcctctggaatctcctgacctcagccccagtctggtagctctagtgatggacagtgag
ggagatgaggaggggttcctggtgaagtcttccctctctcccatctctcccctgacctct
gacgctcgtagcagcggggacgacacctccccagacctcacctgcacacgcacacactcc
gtgtcctcagacggcgaccccccccccgcaaaggatatgggcaaccaggggatcagacac
cgctcctactcctactcctcccccaagatcagcctgctgcccccccgcttctcccgcaaa
accttagccacgcctgcgacctctgacctcagcccagaacagagaacattgagtctatca
gagcagcctctcgaaaaaagaattgaagaggaggagtgggacaagtacaacatcccctcc
aaggtggagtcagagaaatacaaagtgattcgtaccttcagcttcctcaagagcaggatg
tccaccactcgcaacaagaacaagtcaggttgtacagtcatggtccataagggttgtaag
gactctgctcccccgtgtctaaagaaacttcaggataagtatgcagttactatggtgaag
aaccgaacagcatccctcccgcagaacttcacagtgcgagacagtccctctccatgtccg
atctccacctcagcctctctacctatgatgagccagagggacaagagggaaacagcttcc
ctcctcaaccccctctccaggagcgtcccttctgccacagacaggcttagtgagagtcca
gaggcggagtctgacagcaggtggtgtcctggccaatcagaggagcttctgcagaccacc
gagtcgtccacgtccactgactcctccgtcggagaagactgtgtggacgctagtctccat
ggtgacctggatgctgatgctctagactacaaggctgagtcttggagtctgacggtggaa
cacacgttctgtaagaagcaggacaaacgggtggtcaagaggcaggatgttatctatgag
ttgatgcagacagagatgcaccacctccagacactgaggatcatggctgaggtgtttcgg
cgagggatgagggaggaggttcagttggatgcgggcgccgtggaccgtgtctttccttgt
ctggatgaactcctcctcctccaccacaacctcttcaacgccatgagggaacgccgccac
agctccgccaagccacatggggacaggaactacgtcatagtacgcatcggagacatcctg
ttgcaacagttttctgaagacagtgcagagaggatgaaacaggtgtatggagagntctgc
agccatcacacggaggcagtcaccttcttcaaagagttacagcagcacaacaaacgattt
cagaccttcatcaagcaacaaagtaataactatttggtccggaggagagagatcccagaa
tgcatcttgttggtgacccagaggatcactaagtaccctgttctgctggagaggattcta
cagtacactcaggtggacagtgaggagcacatggacctttccagagccctggttctgatc
aaggaagtgatcgcggcagttgacctgatggtcagtgagtttgagcagggtcagcggtta
caggatgttctgaacaggatggagaatcggagctttgccaagctgaagaacgggcacacc
ttcagaaagcaggatgttctggggccaggccagaccctcaaacaccagggcctgttactg
tggaagaccgccaccggacgactcaaagatgtcatggctctccttctgacagacacactg
atcttcctccaggagaaagaccagaagttcatattcgctgctgtggaccagaagccccca
gtgatctctctccagaagctgatcgtcagagaggtagccaatgaagagagagggatgttt
ctgatcagtgcgtcggccgcagggccagagatgtacgaggtccacacttcctcgaaagac
gaacgcaacacctggatgagactaatcagagaggcagtagagagctgtccagaggaagag
gaggagaacactaatgagtcagaagaggagagaagaacagctgaggccagagtccagaag
atacacaaactacaggagaccctatccagtcaggattatcagatatgctccagtctggag
gagaagctacagatctatgctgaactgtctgtcctgaggggcgaggcccaggaaccacac
cctgagccacacctactggtccagccaaacccagaggaggtgccccaggctgcagtactg
cttactgccgcactcagagaggctgagaacctgaggaccactctgtcctcgctgaccttt
tcccccttcagcccttgcagccctcccagggaccccctgtcccaccctgtgtccccagcc
tgccctcctacccccctggacatcccctcagttgcggaggcctcacttggggaccctaat
accagtgatggggagtcagcctcccaagtccttgtactgcagtctctgactaataatatc
aaccttaaggtgtcccacagtgtccaaagcttgacccagttactctatagtctacaggcg
gcggtaaccatccaagacagtttctacgaggttcagaagttcctcctccatgagagtgac
cgccactccccccgctctccgagaccacacaccccatgtctccgtggcaacgctctgcag
gagcaggagaagcaacgtaacctggagaagcgccgtgaggaggtggcggcagcggtacgg
ttgcagggcaggctgcaccaggagagacagcggtgggagagggagtgccaggcgcgccac
agccaacagggggagctggagagcaggctggaggagagggagagacagtgccacctggag
gctgagaggctgaaacaggagcgggaagagctggaggagcagctggaggagtaccagcag
agcctggagaggctgagagagagtcagaggagtgtggagaaggagagggagaggctggag
acccagcagaacctgctgcagagctggagacacagccgacagaggagcctgcctgtcatg
gtcatacccctggaccgctgtcatcaggtgtgtgtgaggggggactcacttcctggccag
cctggaggccatcttgacaacggcggctcagtctttgtcaacgaggcagcggtcaccacg
gcaatggggctcaacaaccgacatgtgcaccacaacctgcagcagcagcagagagggtac
ggagatgaccctcgagcccacaacagcctgaacaccctactggcccgctccagccacgga
cagacactccaactccaccctgacacacacacaccggggggcaccggtgtcaccgggtac
ctctacacacccacagtgggacagggctctgaccaccgcagaaacccaacggtaagaccc
agttccagaccctctgggggacagggctctgagcagaaacccaacggtaagacccagttc
cagaccctcagggggacagggctctga
DBGET
integrated database retrieval system
