Oncorhynchus nerka (sockeye salmon): 115121638 Help Entry 115121638         CDS       T07952                                  Name (RefSeq) collagen alpha-1(II) chain-like   KO K19719   collagen type II alpha Organism one  Oncorhynchus nerka (sockeye salmon) Pathway one04510   Focal adhesion one04512   ECM-receptor interaction Brite KEGG Orthology (KO) [BR:one00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     115121638  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     115121638  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:one00536]     115121638 Glycosaminoglycan binding proteins [BR:one00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    115121638 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen VWC Motif Other DBs NCBI-GeneID:  115121638 NCBI-ProteinID:  XP_029506610 LinkDB All DBs Position Unknown AA seq 879 aa AA seqDB search MFSFVDSRTVLLLVATQVVLLAVVKCQEEDQDPGSCMQDGQSYSDKDVWKPEPCRICVCD TGTVLCDEIICEEIKDCPKPEIPFGECCPICVRDGEAPPSGAPGAKGQKGEPGDITDVVG PRGPGGPMGSPGPRGRDGEPGTPGNPGPPGPSGPNGPPGLGGNFAAQMAGGFDEKAGGAQ MGVMQGPMGPMGPRGPPGPSGAPGPQGFQGNPGEAGEPGSAGPLGPRGPPGPSGKPGDDG EAGKPGKGGDRGPSGPQGARGFPGTPGLPGIKGHRGYPGLDGLKGEGGAAGSKGESGAPG ENGAPGPMGPRGLPGERGRPGPSGAAGARGNDGLPGPAGPPGPVGPSGAPGFPGSPGSKG EAGPTGARGPEGAQGPRGESGTPGSPGPAGASGNPGTDGIGGAKGSAGAPGIAGAPGFPG PRGPPGPQGATGPLGPKGTSGDPGIPGFKGEAGPKGEIGPAGPQGALGPAGEEGKRGPRG EPGAAGPLGPPGERGAPGNRGFPGQDGLAGPKGAPGERGVGGVSGPKGAGGDPGRPGEPG LPGARGLTGRPGDAGPQGKVGPGGAAGEDGRPGPPGPMGARGQPGVMGFPGPKGANGEPG KGGEKGLLGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQGQPGPSGFQGLPGPPGPPG EGGKPGDMGVPGEGGAAGATGPRGERGFPGERGGAGPQGLQGPRGLPGTPGTDGPKGAIG PGGASGAQGPPGLQGMPGERGASGIPGPKGDRGDNGEKGPEGASGKDGSRGLTGPIGPPG PAGPNGEKGESGPSGPSGAAGARGAPGDRGETGPPGPAGFAGPPGSDGQPGVKGEQGEGG QKGDAGAPGPQGPSGAPGPSGPTGVSGPKGARGAQGPSV NT seq 2638 nt NT seq  +upstreamnt  +downstreamnt atgttcagctttgtggattcgaggactgtactgctacttgtagcaacccaagtcgttcta ttagcagttgtcaaatgtcaggaagaagaccaggacccaggcagctgtatgcaggacgga cagagctatagtgacaaggacgtatggaaaccagagccgtgtcgtatttgtgtgtgcgac acgggaactgtcctgtgtgatgaaataatctgcgaggagattaaagactgccccaaacct gagatcccattcggagagtgttgccccatctgcgtgcgggacggggaagcccccccaagt ggggccccgggagctaagggtcagaagggggaaccaggagatatcacagatgtcgtagga ccaagaggacctggaggccctatgggcagtcccgggccccgtggcagagatggcgagcct ggtacccctggtaaccccggcccccccggaccctcaggacctaacggacctcccggcctt ggaggaaactttgctgctcagatggctggaggatttgacgagaaggctggcggagcacag atgggcgtgatgcaaggaccaatgggccctatgggtcctcgagggccacctggcccctct ggagctcctggcccacaaggtttccaaggcaaccccggagaggctggagagcctggatca gctggcccgttgggtccccgtggtccacctggaccctctggtaaacctggagatgacggt gaggctggcaaacccggaaaaggtggtgatcgtggaccttctggtcctcagggagctcgt ggattcccaggaactcccggtctgcctggaatcaaagggcatagaggttatccaggtctt gatggactcaagggagagggtggagctgctggttctaagggggagtctggtgcgcccggt gagaatggcgctcccggacccatgggaccacgtggtctgcctggtgagagaggtcgcccc ggtccctctggagctgctggtgctcgtggtaatgacggtctgcccggccctgctggtcct cctggcccagttggtccatctggtgctccaggcttccccggctctccaggttctaaggga gaagctggccccaccggtgctcgtggacctgagggcgcccagggaccacgtggagagtca ggaacccccggatcccccggacccgccggcgcttctggtaaccctggtactgatggtatt ggtggagctaaaggatcagctggtgctcctggtatcgctggcgcgcctggcttcccggga ccccggggccctccaggaccccagggagccactgggcctctcggaccaaagggaacatct ggtgaccctggtatcccaggtttcaagggtgaggctggacccaagggagagattggaccc gcgggtccccaaggagcccttggccctgcaggagaggaggggaagaggggacccagagga gagcccggcgctgctggacctctcggacctcccggagagagaggcgcccccggtaaccgt ggtttcccaggtcaggatggtctggctggtcccaagggagcccctggcgagcgtggagtc ggcggcgtgtctggccctaagggagccggcggtgaccctggtcgccctggcgagcccggt cttcctggtgcaagaggtcttactggtcgtcccggtgatgcaggtcctcaaggaaaagtt ggacccggtggtgctgctggtgaggatggtcgccctggtccccctggccctatgggagcc cgcggtcagcctggcgtgatgggattccccggacccaagggagccaacggcgaacctggc aagggcggagagaagggattgctcggtgcgccaggtctgagaggtcttcctggtaaggat ggtgagaccggagctgctggaccccctggccctgctggccctgctggagagagaggagag caaggacaacctggaccttctggcttccagggtctgccaggacctcccggcccccctggt gagggtggcaagcccggtgacatgggagttccaggagagggtggagctgctggtgccact ggaccaagaggtgagcgtggtttcccaggagagagaggaggtgctgggcctcaggggctt cagggaccccgtggtcttcctggaactcctggaactgacggacctaagggcgcgatcgga ccaggtggtgcatcgggtgcccagggaccccccggtctgcaaggtatgcccggagagaga ggagcctcaggcatccccggacctaagggagacagaggtgacaacggagagaagggacct gagggtgcttctggcaaagacggttcaagaggtttgactggtccaattggtcctccaggc ccagctggtcccaatggagagaagggtgaatctggtccctctggaccttccggtgctgct ggtgcccgaggtgctcctggtgacaggggtgagactggacctcctgggcctgctggcttc gctgggcctcctggatctgatggtcagcccggagtcaagggagagcagggagagggtgga cagaagggagacgctggtgcccctggaccacagggaccctccggagctcctggaccttcc ggacctactggcgtttctggacctaaaggtgctcgcggtgctcagggaccctctgtaa

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