Oncorhynchus nerka (sockeye salmon): 115121660
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Entry
115121660 CDS
T07952
Name
(RefSeq) protocadherin-8-like
KO
K16499
protocadherin delta 2
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
one04515
]
115121660
Cell adhesion molecules [BR:
one04515
]
Cadherins
Protocadherins
115121660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
115121660
NCBI-ProteinID:
XP_029506633
EnsemblRapid:
ENSONEG00000023003
LinkDB
All DBs
Position
Unknown
AA seq
971 aa
AA seq
DB search
MGFCGFRGVGECVVFAILFYSVQSTTTRYYTYEEDAPGTEIGNLSQDLKIDPAEDPQTSF
RFMQENNSCVIQMREIDGLLTVGETIDREQLCPRSPRCFVTFDIVAFSKEKFQLIHVEIE
VRDINDNSPQFLHNETTLEISENVQLDSRFPLDIAVDHDVGNNYIQSYHISPSSHFIVDV
RSREDGVKYAELVLVKAMDREAEDSYTVEVTATDGGEPPRSGSMTVHIKVLDFNDNSPTF
EHNSLKVELYEDSPVGYQVLKVHAFDLDAGINGEVVYGFVEDTSSEAMRIFNIDRISGAV
TLKTLVDYEKKISYELKIKASDLGTNSIPSTCKVVVDVVDVNDNAPEITIKPKTSTSDDV
AYITEAAAEESFVALISTSDSDSGSNGYVRSSLHGHEHFKLQQAYGDSFMIVTTTTLDRE
TIPEYNLTVVAEDLGTPPFKTIKQYTIRVTDENDNAPLFSKSIYEVSVLENNIPGSYITT
VVARDLDRGKNAKVSYKLIDSEVVGDASISTYVSIDPVSGSLYSLRSFDFETLQQIELTI
QADDKGSPQLSSTSVIRIKVVDQNDNYPYFTFPVMLNDSAEIPLPVNAPLGYLALRVQGQ
DEDEGMNGELSYRIVQGDSKIFSINKDTGEIALKQGLASAIGDVLEIKIALSDSGRSPLS
SSATIHFVVSDLQLSDDQLVIVLRSTDEESAGLDISVVVIIILGGGCTLLLIAIAIVVIT
CKLNQGGKDHDSKRDVTHSLFDSRHHPRLNSAEPNMFGDPRGFLNERTSSSLDESSLYEE
KSGELESQMFLPPKPFQPSSVWQGDKYYPQISSGIDQQSVKDSGKGDSDFNDSDSDISGD
GGKKNLRTFQPWAKGSFHATNTLAVDCQGTYCVIPTQSFQAPRDNAYTIGFIQAPVYNNA
HAYPHSWKDSGYNTSIPKARNTMQTFSNHTGTLPSYFTHQKRQSPAGLDEIQEHNQDITT
MATISEVATIL
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atgggtttctgcgggtttcgaggagttggagagtgcgtggtgtttgctattctgttctac
tcggttcagtctacgactacaaggtactacacatatgaagaggatgcgcccgggacagag
attggaaatctgtctcaggatttaaagatagacccagctgaggaccctcaaacatctttc
cgcttcatgcaggagaacaattcgtgtgtgattcaaatgagggagattgatggactttta
actgttggggaaacaattgaccgggagcagctgtgccctaggtccccgcggtgttttgtc
accttcgacatagttgccttctccaaagaaaagtttcagctgattcacgtagagatcgag
gtaagggacataaacgacaattcaccccagtttctccacaacgagacgacccttgaaata
tccgagaatgttcagctggactcccgattcccgttggacatcgctgttgaccatgatgtc
ggcaataactacatccaaagttaccatatctctccctccagccatttcatagttgatgtg
cgaagcagggaggatggagtgaagtatgctgaacttgtgcttgtgaaagctatggataga
gaggctgaagattcctatacagttgaagtgacggcaacagatggcggagagccacccagg
tccggatcaatgactgttcatatcaaagtgctagattttaatgacaacagcccaacgttt
gagcacaactcactaaaagttgaactttatgaggattctcctgtaggttaccaagtgctt
aaggtgcatgcgtttgatctagatgctggtatcaatggcgaggtagtgtatggatttgta
gaagacacatcatctgaagcaatgcgtatttttaatatagaccggatttccggtgctgta
actttaaaaacattggttgattacgagaagaagatatcctatgaactgaaaattaaagca
tccgatttaggcactaattctattccatcgacttgcaaagtggttgttgatgtcgtagat
gtaaatgataacgcaccagaaatcaccatcaagccaaagacctcgacgagtgacgatgtg
gcttacatcacggaggccgcagcggaggaaagttttgtggcgctaatcagcacctcggac
agcgactctggctcgaacggttacgtgcgcagtagcctacacgggcacgaacatttcaag
ttacaacaggcctacggggacagttttatgattgtaacaaccaccactttagatagagaa
acgatcccagagtataacctcactgtggtggctgaagaccttggaactcctcctttcaaa
accatcaagcagtataccatcagagtgacggacgagaacgacaacgcccccctcttcagt
aaatccatttatgaagtttctgtcctggaaaataatattcccgggtcatatataactact
gttgtagcacgggaccttgatcggggtaaaaacgccaaagtgtcatataaactcatagac
tccgaggttgtcggggatgcttccatttcgacgtatgtgtctatagacccagtatcaggg
tcattgtatagcctgagatctttcgattttgaaacgctccagcagattgaattaaccatc
caggctgacgacaagggctcacctcaactgtcaagcacatccgtgatcagaatcaaagtg
gttgatcagaacgacaactatccctattttacctttcccgttatgcttaatgactctgct
gaaattcctcttcctgtcaatgcaccattggggtatctggcactacgggtccaaggtcag
gatgaggatgagggtatgaatggtgagctcagctacagaatcgtacaaggtgactctaag
atattttcaatcaataaagacactggagaaatagctttaaaacagggtctggcctctgct
attggagacgtgttggaaatcaagattgcactgagtgacagtgggagatcccctctctcc
agcagtgccaccattcactttgttgtctcagacttgcagctctcagacgaccaacttgtc
attgtattacggtcaactgatgaggaaagcgcaggcttggatatttcagtagtagtaatc
attatactcggcgggggttgtactctgctgctgattgccatagcaattgttgtcatcaca
tgcaaactgaaccaaggagggaaggaccatgactccaagagagacgtgactcacagcctg
tttgactccaggcatcatcccaggctcaactctgcagaacccaacatgttcggtgaccca
agaggtttcctcaatgaaaggacttcttcatctcttgatgagtccagcctatatgaagag
aaaagtggagagttggagtcccagatgttcctgcctcccaagcctttccaaccatcatct
gtgtggcaaggggacaaatactacccgcaaattagcagtggcattgaccagcaaagcgtg
aaggacagtggaaaaggagacagtgacttcaatgacagtgactctgacatcagtggggat
ggaggcaagaagaaccttcgcaccttccagccctgggccaaaggttcattccacgccact
aacaccctcgctgtggattgccaaggcacttactgtgtaattccaacccaaagcttccag
gctcccagagacaatgcatacacaataggttttatccaagcaccggtctacaacaatgcg
catgcctatccccactcctggaaagactccggctacaacacaagcattcctaaagcaaga
aacaccatgcagacattctctaatcacactggcaccctcccatcttacttcacacatcaa
aagagacaatctcctgccggacttgatgaaattcaggagcacaaccaagatattactaca
atggcaaccatatctgaagttgccaccattttgtaa
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