KEGG   Oncorhynchus nerka (sockeye salmon): 115121678
Entry
115121678         CDS       T07952                                 
Symbol
nbn
Name
(RefSeq) LOW QUALITY PROTEIN: nibrin
  KO
K10867  nibrin
Organism
one  Oncorhynchus nerka (sockeye salmon)
Pathway
one03440  Homologous recombination
one04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:one00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    115121678 (nbn)
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    115121678 (nbn)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:one03032]
    115121678 (nbn)
   03400 DNA repair and recombination proteins [BR:one03400]
    115121678 (nbn)
DNA replication proteins [BR:one03032]
 Eukaryotic type
  DNA Replication Termination Factors
   MRN complex
    115121678 (nbn)
DNA repair and recombination proteins [BR:one03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    MRN(MRX) complex
     115121678 (nbn)
    BRCA1-C complex
     115121678 (nbn)
SSDB
Motif
Pfam: Nbs1_C NIBRIN_BRCT_II FHA Yop-YscD_cpl BRCT RTT107_BRCT_5 PTCB-BRCT
Other DBs
NCBI-GeneID: 115121678
NCBI-ProteinID: XP_029506660
LinkDB
Position
Unknown
AA seq 787 aa
MWTLNPLESGGVTHYLLPEKEYVVGRKNCEVILPNDQSISRAHAHLTATDQALTLKDSSK
YGTFVNEERLSGDSPRSLTAGDRVTFGVFHSKFSVQQVTVVVCSSCVDNEGKVSLSQTLH
LLGGRLTNTWTQDCTHLVMPTVKVTIKTICALLCCRPIVKQEFFIELTKALQQKQPPPKA
ESFFPEIDEPSLNKDEVDLTERPERKELFTSKTFLFLNAKQQKRLSLAVSCGGGRSQLLE
EGSVPVSLLESPLSCVIGMATGNSQALLPHSTKKWADSVGRILQRKGLRFITESEIGLAA
IYVSCDKYCNPSNRMADSESMRKKPTIPGATLSQNAPVDETVMPAASQNITANAVNTEPS
QGISGVDVAGVSAVGETPERDQSRTTSHLNRPKPSGRELSGTCTVAETMMSSFSTSDSAG
GGGSDRKKGELQHPGGGKGDAITRFLATAPRTNGGVQTMSPQKRSSQKQQVSQKCSPQKQ
SALTNFFQPVGKKRPREGEESPTVQSEAKFSRREEENGEYEEDSTTALRRPPTPPSPPQA
GPRANAAQVHICFQVRLRLCQRGSPTLPSRGSNPGRGRRLRRLKGVGLXIEMDELESIMS
EDMDESDEPMSASQGQRLKLTEKSSTNQGQRSQLTRQESGLDSEERSSASRRQRAEPVAE
VKTREPETDVKQEASGLGSENLPSRLIVVEFKCLTVATPARPKPRPMETHDNVNRKDFKR
FSKVPVPGAQGLPNIIGGSDLLAHNRGKNSELEEWLRDAAEDERQNKKEETLGDDLFRYN
PKPTKKR
NT seq 2364 nt   +upstreamnt  +downstreamnt
atgtggacactgaaccctttagaatccggaggtgtcacccactacctcctgccagagaag
gagtatgtggtgggccgtaagaactgtgaggtcatcctgcccaatgaccagtccatcagc
cgggctcatgctcacctcactgctacagatcaggccctgaccctgaaggacagttctaag
tatggcacgtttgttaacgaggagcgtctgtcaggagactcccctcgcagcctgacggca
ggggacagagtgacatttggggtctttcacagcaaattcagtgtgcagcaggtaactgtg
gtggtgtgctcgtcctgtgttgataatgaagggaaggtctctctgtctcagaccctgcat
cttctgggtggccggctgaccaacacctggacacaggactgcactcacctggtcatgccc
actgttaaagtcaccatcaagactatctgtgcgttgctgtgctgtcggcccatagtcaag
caggagtttttcattgagctcaccaaagccctgcaacagaaacaaccacctccaaaagct
gagagtttctttccagagatagacgagcccagtctgaataaggatgaggtggacctgaca
gagaggccagaacgtaaagaacttttcactagcaagaccttcctcttcctcaatgccaaa
cagcaaaagcgtctgagtttggcagtgagttgtggaggtgggaggagccagctcttggag
gaggggtctgtccctgtgtcactcctggaatcaccattgagctgtgtgatcggcatggca
acgggaaactcccaagcactactgccccactccactaagaagtgggcagactctgtgggg
aggattctacagaggaaaggtcttcgattcatcacagagtctgagatcggattggctgcc
atctatgtcagctgtgacaagtactgcaatccttccaatcgaatggctgactcagaatcc
atgagaaagaagcccaccatccctggtgccacgctatcccagaatgcaccagtggacgag
acggtaatgccagcggcatctcagaacatcacagccaatgctgtaaacacagagccgtca
cagggcatcagtggggtggacgtggctggggtgagcgcagttggagagacccctgagagg
gaccagagccggaccacctctcatcttaaccgacccaaaccctcaggccgagagctgtca
gggacctgcacagtggcagagactatgatgtcatcattcagcacctcagacagtgctggt
ggtggcggctcggacagaaaaaagggagagctacaacatccaggtggagggaaaggtgat
gctatcaccagattcctggccacagcccctcggaccaacggaggagtgcagacgatgtcc
ccacagaagcgctcctcccagaaacaacaggtctcgcagaaatgttccccccagaaacag
tctgccctcactaatttcttccagccggttggcaagaaaagacctagggaaggcgaggaa
tcccctactgtccaatcagaggccaagttctccaggagggaagaagagaatggagaatac
gaagaggacagtaccacagcactcaggagacctccaaccccaccctcccccccacaggca
ggtcccagggccaacgcagctcaggtgcacatctgtttccaggtcagactgaggctctgt
cagaggggttctccaaccctgcccagcaggggctccaatccaggaagaggaaggagattg
aggagactaaagggagtggggctttagatagagatggacgaactggagtccatcatgtct
gaggacatggacgaatcggatgagcccatgtcagccagtcaaggccagcggttgaagctg
acggaaaagagttcaaccaatcaaggccagaggtctcaactgactagacaagagtcaggc
ttggattcagaagagcgatcgtcagccagcagacgacagcgagcggagcctgtagctgag
gtcaagacgagagagccagagactgatgtcaaacaggaagcctcaggtttagggagtgag
aatctccccagcagacttatagtggtggagttcaaatgcctcaccgtggcaacaccggca
agacctaaaccacgccccatggagacgcacgacaatgtcaacaggaaggactttaaacgc
ttcagcaaggtcccagttcccggtgcccagggtttgcccaacatcatcggcgggtcagac
ctgttggcccacaaccgaggcaagaactctgagctggaggagtggctgagagacgcagca
gaggatgagcgtcagaacaagaaagaggagactttgggagatgacctcttcaggtacaac
cccaaacccaccaagaaaagatga

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