Oncorhynchus nerka (sockeye salmon): 115121678
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Entry
115121678 CDS
T07952
Symbol
nbn
Name
(RefSeq) LOW QUALITY PROTEIN: nibrin
KO
K10867
nibrin
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03440
Homologous recombination
one04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
115121678 (nbn)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
115121678 (nbn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
one03032
]
115121678 (nbn)
03400 DNA repair and recombination proteins [BR:
one03400
]
115121678 (nbn)
DNA replication proteins [BR:
one03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
115121678 (nbn)
DNA repair and recombination proteins [BR:
one03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
115121678 (nbn)
BRCA1-C complex
115121678 (nbn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nbs1_C
NIBRIN_BRCT_II
FHA
Yop-YscD_cpl
BRCT
RTT107_BRCT_5
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
115121678
NCBI-ProteinID:
XP_029506660
LinkDB
All DBs
Position
Unknown
AA seq
787 aa
AA seq
DB search
MWTLNPLESGGVTHYLLPEKEYVVGRKNCEVILPNDQSISRAHAHLTATDQALTLKDSSK
YGTFVNEERLSGDSPRSLTAGDRVTFGVFHSKFSVQQVTVVVCSSCVDNEGKVSLSQTLH
LLGGRLTNTWTQDCTHLVMPTVKVTIKTICALLCCRPIVKQEFFIELTKALQQKQPPPKA
ESFFPEIDEPSLNKDEVDLTERPERKELFTSKTFLFLNAKQQKRLSLAVSCGGGRSQLLE
EGSVPVSLLESPLSCVIGMATGNSQALLPHSTKKWADSVGRILQRKGLRFITESEIGLAA
IYVSCDKYCNPSNRMADSESMRKKPTIPGATLSQNAPVDETVMPAASQNITANAVNTEPS
QGISGVDVAGVSAVGETPERDQSRTTSHLNRPKPSGRELSGTCTVAETMMSSFSTSDSAG
GGGSDRKKGELQHPGGGKGDAITRFLATAPRTNGGVQTMSPQKRSSQKQQVSQKCSPQKQ
SALTNFFQPVGKKRPREGEESPTVQSEAKFSRREEENGEYEEDSTTALRRPPTPPSPPQA
GPRANAAQVHICFQVRLRLCQRGSPTLPSRGSNPGRGRRLRRLKGVGLXIEMDELESIMS
EDMDESDEPMSASQGQRLKLTEKSSTNQGQRSQLTRQESGLDSEERSSASRRQRAEPVAE
VKTREPETDVKQEASGLGSENLPSRLIVVEFKCLTVATPARPKPRPMETHDNVNRKDFKR
FSKVPVPGAQGLPNIIGGSDLLAHNRGKNSELEEWLRDAAEDERQNKKEETLGDDLFRYN
PKPTKKR
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgtggacactgaaccctttagaatccggaggtgtcacccactacctcctgccagagaag
gagtatgtggtgggccgtaagaactgtgaggtcatcctgcccaatgaccagtccatcagc
cgggctcatgctcacctcactgctacagatcaggccctgaccctgaaggacagttctaag
tatggcacgtttgttaacgaggagcgtctgtcaggagactcccctcgcagcctgacggca
ggggacagagtgacatttggggtctttcacagcaaattcagtgtgcagcaggtaactgtg
gtggtgtgctcgtcctgtgttgataatgaagggaaggtctctctgtctcagaccctgcat
cttctgggtggccggctgaccaacacctggacacaggactgcactcacctggtcatgccc
actgttaaagtcaccatcaagactatctgtgcgttgctgtgctgtcggcccatagtcaag
caggagtttttcattgagctcaccaaagccctgcaacagaaacaaccacctccaaaagct
gagagtttctttccagagatagacgagcccagtctgaataaggatgaggtggacctgaca
gagaggccagaacgtaaagaacttttcactagcaagaccttcctcttcctcaatgccaaa
cagcaaaagcgtctgagtttggcagtgagttgtggaggtgggaggagccagctcttggag
gaggggtctgtccctgtgtcactcctggaatcaccattgagctgtgtgatcggcatggca
acgggaaactcccaagcactactgccccactccactaagaagtgggcagactctgtgggg
aggattctacagaggaaaggtcttcgattcatcacagagtctgagatcggattggctgcc
atctatgtcagctgtgacaagtactgcaatccttccaatcgaatggctgactcagaatcc
atgagaaagaagcccaccatccctggtgccacgctatcccagaatgcaccagtggacgag
acggtaatgccagcggcatctcagaacatcacagccaatgctgtaaacacagagccgtca
cagggcatcagtggggtggacgtggctggggtgagcgcagttggagagacccctgagagg
gaccagagccggaccacctctcatcttaaccgacccaaaccctcaggccgagagctgtca
gggacctgcacagtggcagagactatgatgtcatcattcagcacctcagacagtgctggt
ggtggcggctcggacagaaaaaagggagagctacaacatccaggtggagggaaaggtgat
gctatcaccagattcctggccacagcccctcggaccaacggaggagtgcagacgatgtcc
ccacagaagcgctcctcccagaaacaacaggtctcgcagaaatgttccccccagaaacag
tctgccctcactaatttcttccagccggttggcaagaaaagacctagggaaggcgaggaa
tcccctactgtccaatcagaggccaagttctccaggagggaagaagagaatggagaatac
gaagaggacagtaccacagcactcaggagacctccaaccccaccctcccccccacaggca
ggtcccagggccaacgcagctcaggtgcacatctgtttccaggtcagactgaggctctgt
cagaggggttctccaaccctgcccagcaggggctccaatccaggaagaggaaggagattg
aggagactaaagggagtggggctttagatagagatggacgaactggagtccatcatgtct
gaggacatggacgaatcggatgagcccatgtcagccagtcaaggccagcggttgaagctg
acggaaaagagttcaaccaatcaaggccagaggtctcaactgactagacaagagtcaggc
ttggattcagaagagcgatcgtcagccagcagacgacagcgagcggagcctgtagctgag
gtcaagacgagagagccagagactgatgtcaaacaggaagcctcaggtttagggagtgag
aatctccccagcagacttatagtggtggagttcaaatgcctcaccgtggcaacaccggca
agacctaaaccacgccccatggagacgcacgacaatgtcaacaggaaggactttaaacgc
ttcagcaaggtcccagttcccggtgcccagggtttgcccaacatcatcggcgggtcagac
ctgttggcccacaaccgaggcaagaactctgagctggaggagtggctgagagacgcagca
gaggatgagcgtcagaacaagaaagaggagactttgggagatgacctcttcaggtacaac
cccaaacccaccaagaaaagatga
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