Oncorhynchus nerka (sockeye salmon): 115121960
Help
Entry
115121960 CDS
T07952
Name
(RefSeq) tripartite motif-containing protein 35-like
KO
K12012
tripartite motif-containing protein 35
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
one04121
]
115121960
Ubiquitin system [BR:
one04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
115121960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-C3HC4
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-RING_6
zf-C3HC4_3
zf-C3HC4_2
zf-RING_5
zf-RING_2
U-box
DUF4200
TetR_C_37
Prok-RING_4
MbeB_N
zf-Nse
SGSH_C
LbR_Ice_bind
Gp58
zf-C3HC4_5
End3
Motif
Other DBs
NCBI-GeneID:
115121960
NCBI-ProteinID:
XP_029506968
LinkDB
All DBs
Position
Unknown
AA seq
534 aa
AA seq
DB search
MTDSYLDSYLCCHICSETFREPVSLGCHHSFCSSCLDKFWDQAKNKNCPVCRRKCSKDHL
KVNFQLKELSDKYAGRQKAGEKDSIPGEKEGIPGEKDSIPGEKDCIPGEKDSIPGEKDSI
PGEKDCIPGEKDSIPGEKDSIPDEDRAVVCPKHTDEPKWFCEVEQRAVCHVCEFPAHHGH
TVVPLEQAVKDLKDKLTSDLDSLQSKQVKCKDIEETYNQMFQYSKKQLVSTERQIRGEFE
KLHQFLREEEEARLAALRKEEEEKGKMIAREMKHIQDQISSLTENITAVEQELQKRDVPF
LKSYKHTQTFSRAQDTLPDPQLVSGALIDVAKHLGNLQFRVWEKMQGIVKYTPVILDPNT
ANNCLSLSDDLTSVSQTDPIQQLPDNPERNTIYITVLSSEGFSSGKYSWEVEVGDHPQWY
IGVAKESIKRQEKVKYFNPEFGVWLLMLRSGKYQIIGKTFTLKRRPQRIRVQLDYDRGEV
SFYDPKDMTHIYTFRDTFTERLYPYFFIGKVGDADNTGIQICQSEVSLTVKSFQ
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgacagatagttacctggatagttacctgtgctgccatatttgttcagagactttcaga
gagcctgtttctctgggctgccaccacagcttctgttccagctgtctggacaaattctgg
gatcaagccaaaaacaagaattgtccggtatgtaggaggaagtgttccaaggatcatcta
aaagttaactttcagttgaaggaactgtctgataaatatgctgggagacagaaagcaggg
gagaaagacagtattccaggggagaaagaaggtattccaggggagaaagacagtattcca
ggggagaaagactgtattccaggggagaaagacagtattccaggggagaaagacagtatt
ccaggggagaaagactgtattccaggggagaaagacagtattccaggggagaaagacagt
attccagatgaagacagagcagtggtttgtcctaaacacacagatgaacctaaatggttc
tgtgaggtggagcagagagctgtgtgtcacgtctgtgagtttcctgcacatcatggacac
acagtggttcccttagaacaggcagtgaaagacctgaaggacaaactaacctcagactta
gactcactgcagagcaaacaggttaaatgtaaagacatagaggagacatacaaccaaatg
tttcaatactccaagaagcagctggtgtccacagagagacagatcagaggggagtttgag
aagcttcaccagttcctgagggaggaagaggaggccagactggcagcactgaggaaggaa
gaggaggagaaggggaagatgattgccagagagatgaagcacattcaagaccagatctct
tctctcacagaaaacatcactgctgtggaacaagaactccagaaacgagacgtgccattt
ctcaagagctacaaacacacacagacattctccagagcccaggacacactgccggatcca
cagctggtctcaggagcactgatagatgtggccaaacacctgggcaacctgcagttcaga
gtctgggagaagatgcaggggattgtcaaatacactcctgtgattctggaccccaacact
gcaaacaactgtctctctctgtctgatgatctgaccagtgtgagtcagacagacccaata
cagcagctccctgacaacccagagaggaacaccatttacatcacagttctgagctctgag
gggttcagctcaggaaaatacagctgggaggtggaggtgggggaccaccctcaatggtat
ataggcgtggccaaggagtcaatcaaaaggcaggagaaagtaaaatattttaacccagag
tttggagtctggcttttaatgctgagaagtggtaagtatcaaataataggtaaaaccttc
actctgaagaggagaccccagaggatcagagtacagctggactacgacaggggagaggtg
tccttctacgatcccaaagacatgacacacatctatactttcagagatacatttactgag
agactctacccatacttttttattggaaaggttggtgatgctgacaacactggtatacag
atctgccaatcagaagtgtctcttacagtgaagtcattccagtga
DBGET
integrated database retrieval system
