Oncorhynchus nerka (sockeye salmon): 115121975
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Entry
115121975 CDS
T07952
Name
(RefSeq) host cell factor 1-like isoform X1
KO
K14966
host cell factor 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03083
Polycomb repressive complex
one04980
Cobalamin transport and metabolism
one05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
115121975
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
115121975
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115121975
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
one01009
]
115121975
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
one03036
]
115121975
03029 Mitochondrial biogenesis [BR:
one03029
]
115121975
Protein phosphatases and associated proteins [BR:
one01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
115121975
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
115121975
HMT complexes
COMPASS/SET1 complex
115121975
MLL-HCF complex
115121975
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
115121975
Mitochondrial biogenesis [BR:
one03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
115121975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_5
Kelch_3
Kelch_4
Kelch_1
Kelch_6
Kelch_2
Motif
Other DBs
NCBI-GeneID:
115121975
NCBI-ProteinID:
XP_029506984
LinkDB
All DBs
Position
Unknown
AA seq
642 aa
AA seq
DB search
MASGSVLQPRWKRVLGWSGPVPRPRHGHRAVAIKELMVVFGGGNEGIVDELHVYNTATNQ
WFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRWEWKRLKAKSP
KNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYMLELRAGSSVVGWD
IPITYGVLPPPRESHTAVVYTEKSRLVIYGGMSGCRLGDLWILDIDTLTWNKPSINGTAP
LPRSLHSATTITNKMYVFGGWVPLVMDDVKVATHEKEWKCTNTLACLNLDSMVWESVLLD
SLEDNIPRARAGHCSVAINSRLYVWSGRDGYRKAWNNQVCCKDLWYLETEKPRPPSRVQL
VRANTSSLEVSWGAVPTADTYLLQLQKYDIPPAPAATTTGVSPATPLPVNSSPKSPVSAS
AVSAQGHPLQGITLVPSMPGSPVPARGPAILKVSAPHSTTGASIVTVRQANQGGKSPVMV
TSLPAGVRMVVPAQVAQGTPMGSSPQMSGMAALAAAAAATQKIPPSTATMQLPAGATIVK
TVAMSPGAQTVKVASPVMISNPATRMLKTAAAQVGTSGVATPGTPNRPIITVHKSGTVTV
AQQHQVVTTVVGGVTKTITLVKSPLTLGGGGTLVRSHLTEAV
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggcatctggctcagtcctgcagccacggtggaagcgggttttgggttggtccggtcct
gtaccccggccccgacatgggcaccgtgcggttgcaatcaaagaattgatggtcgttttc
ggggggggcaatgaaggaattgtggatgagttgcacgtttataacacagcgaccaaccag
tggttcattcctgctgtccgtggcgacatcccgcctggctgtgctgcgtatggtttcgtg
tgcgacggcaccaggctgctggtgttcggagggatggtggaatatggcaaatacagcaat
gatctgtatgaactgcaggctagccgctgggagtggaagcgtctgaaggccaaatctcct
aagaacggccctcctccctgtccccgtctgggccacagcttctccctggtagggaacaaa
tgctaccttttcggaggactggctaacgacagcgaggaccccaagaacaacatccccaga
tacctgaatgatctgtatatgttggagctgcgtgccggctccagtgtggtgggttgggac
atccccatcacctacggggtgttgcccccgcccagagagagccacaccgccgtcgtctac
acagagaagtcccgtctggtcatctatggaggcatgagtggttgtcgtctgggggatctg
tggatcttagacatagacaccctcacatggaataagccctcgatcaacggaacagctcct
ctccctcgcagcctccactctgccacaactatcaccaacaagatgtacgtgttcggaggc
tgggttcccctggtgatggatgatgtcaaagtagcgacacacgagaaggagtggaagtgc
accaacacactggcctgtctcaacctagactcgatggtgtgggagtcagttctactggac
tctctagaggataacatccccagggcccgagccggtcactgctccgtggccatcaactca
cgtctgtacgtgtggagcggacgggacggctaccgcaaggcctggaacaaccaggtgtgc
tgtaaggacctctggtacctggagacagagaagccccgccccccgtcgagggtgcagctg
gtgagagccaacaccagtagcctggaggtgagctggggggcggtaccaacggcagacacc
tacctgttacagctgcagaagtacgatatcccccccgccccggccgccaccacgaccggc
gtcagccccgcgacaccactgccggtcaactcctcccccaaaagccccgtctcggcctcg
gcagtgtccgcccagggccaccctctccagggcatcaccctggtcccctccatgcctgga
agtccagttcctgctcgcggaccagctattcttaaggtgtctgctccccattccaccaca
ggcgcctccatcgtcacggtgagacaggccaaccagggcgggaaatctcctgtcatggtt
acatcacttcctgctggggtccgaatggtggtgccggcccaggtcgcacagggaacccca
atgggcagcagccctcagatgagtggcatggctgcgttggctgcagcagctgcggccact
cagaagatcccgccttccacggccaccatgcagttgccagccggtgccaccatagtcaag
acagtagccatgagccctggcgcacagactgtcaaagtagcttcgcctgttatgattagt
aacccagctactcgcatgctgaagactgctgcggctcaggtgggcacgtcaggtgtcgcc
acacccggaacgcccaatcggccaatcatcaccgtgcacaagtctggcacggtgacggtt
gcccagcaacaccaggtggttaccacggtagtgggaggagtcaccaagaccatcactctg
gttaagagtcccctcactctggggggaggtggtacgctggtaagatcacacctgacagag
gctgtttag
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