Oncorhynchus nerka (sockeye salmon): 115122036
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Entry
115122036 CDS
T07952
Name
(RefSeq) intraflagellar transport protein 56 isoform X1
KO
K19685
intraflagellar transport protein 56
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
one03037
]
115122036
Cilium and associated proteins [BR:
one03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
115122036
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANAPC3
TPR_19
TPR_16
TPR_2
TPR_14
TPR_6
Motif
Other DBs
NCBI-GeneID:
115122036
NCBI-ProteinID:
XP_029507045
LinkDB
All DBs
Position
Unknown
AA seq
582 aa
AA seq
DB search
MILSRVKPAAVGGEIPVNKKAKEKKSPLVEDFLVQRDYLGAITLLEFQRNVGERGEDADL
WLAYCAFHLGDYKRAMEEYKALTDKPDCRPDVWVYLACTLFFLGLYKEAEEASRKAPKCQ
LQNRLLFHLAHKFNDEKQLMGFHQELEDVTEDQLSLASIHYMRSHYQEAIDIYKRILLQN
REKITETGEEDSDCLCRDFLALNVYVALCYYKLDYYDVSQEVLAVYLQSVPDSTIALNLK
ACNHFRLYNGKAAETELKNLIDISSSSFEFAKELIRHNLVVFRSGEGALQVLPALIDVIT
EARLNLVIYYLRQDDVQESYQLIKDLEPTTPQVQGSVSLNVHQRTEYILKGVVNAALGQE
MGSRDHLKIAQQFFQLVGGSASECDTIPGRQCMASCFFLLRQFEDVLIYLNSVKSYFYND
DAFNFNYAQAKAAVGNYREAEEIFLLIQNDKNKSDYVYLSWLARCYIMNQKARLAWELYM
KMETSAESFSLLQLIANDCYKMGQFYYSAKAFDVLERLDPNPEYWEGKRGACVGIFQLIL
ASREPREALREVLPLLRHTGNPQVEYIIRILKKWAKDNRVSL
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgattctgtccagagtaaagccagcagctgttggtggggagatcccagtaaataagaag
gcaaaagaaaaaaagtcaccacttgtcgaggacttcctagttcaaagagactatctgggg
gccattacattgttggagtttcagcgcaatgttggcgagcgaggggaggatgcagacctg
tggttggcctactgtgctttccaccttggtgactacaagagagccatggaggaatacaag
gccctgacagacaaaccagactgccgcccagatgtgtgggtctacctggcctgtactctc
ttcttcctggggctttacaaagaagcagaggaggcttcacgcaaggcccctaaatgccag
ctgcagaatcgactactgttccacttggctcacaagttcaatgatgagaagcagctgatg
ggtttccaccaggagttggaggatgtgacagaggaccagctcagcctggcctccatccac
tacatgcgctcccactaccaggaggccatcgacatctacaaacgcatcctgctgcagaac
agagagaagataacggagactggagaggaggatagtgactgcttgtgcagagacttcctg
gccctgaatgtgtatgtggctctgtgctactacaagttggactactacgatgtgtcccag
gaggtgctggctgtttacctgcagagcgtcccagactccaccatcgctctcaacctcaag
gcctgcaaccacttcaggctctacaacggaaaagcagcagagacagagctgaaaaacctg
atagatatctcctccagctcctttgaatttgccaaggagttaatccgacacaacctggtg
gtgtttcgtagtggggagggggccttgcaagtgctgcctgcactgattgatgtcattact
gaggctcgtctcaatctggtcatctactacctcagacaagatgatgtccaggagtcctac
cagctcatcaaagacttagaacccaccacaccacaggttcagggcagtgttagtcttaat
gtacatcagcgtacagagtacatcttgaagggggttgtgaatgctgcacttggacaggag
atggggtcgagagatcatctgaagattgctcagcagtttttccagctggttggtggctca
gctagcgaatgtgacaccatccctggcagacagtgcatggcttcttgtttctttctgctc
aggcagtttgaggatgtgctcatctacctcaactctgtcaagagttacttctacaacgat
gatgccttcaacttcaactatgcacaggccaaagctgctgttggcaactacagggaggca
gaggagatcttcctgttgattcagaatgacaagaacaagagtgactatgtgtacctgagc
tggctggcacgctgctacattatgaaccagaaggcccgtctggcctgggagctctacatg
aagatggagacctcagcagagtccttcagcctcctgcagctcattgccaacgattgctac
aagatgggccagttctactactcagcaaaggcatttgatgtcttggagagattggacccc
aaccctgagtactgggagggcaaaaggggggcctgtgtgggtatctttcagctaattttg
gccagcagagaacccagggaggctttgagggaagtgctgcccttgctgaggcacactggg
aatcctcaagtggaatacatcatcaggattctgaagaaatgggccaaggacaacagggtt
tctctgtga
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