Oncorhynchus nerka (sockeye salmon): 115122333
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Entry
115122333 CDS
T07952
Name
(RefSeq) collagen alpha-1(VIII) chain-like
KO
K23455
collagen type VIII alpha
Organism
one
Oncorhynchus nerka (sockeye salmon)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
115122333
NCBI-ProteinID:
XP_029507398
LinkDB
All DBs
Position
Unknown
AA seq
772 aa
AA seq
DB search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NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atggccaagcccctcccctctactcatctattggtggtggcactccagctgtgtctagta
ctacgccaccatgcccgtggggcggcatattacgggcacaagcagccgcagcacccacag
cagcaccttccccagcagcaccagcccatgcaacagatacctcacatgcccctagggaac
gggtatgggaacgggaacgggaatggggacgggctgcccaagcaacagtacgggaaggaa
atgccacaacatatgccatatggcaaagagatgccatatgtgctgccacagtatgggcaa
gagcttccacagatgcttccacagatgcacgaacaaccccagatgccacccaataagggc
aagggaaaaggtcagtcatatcccagtaatgggaaaggccttggaggcccaccacctgat
gataggggactacagggtcctggtcccgaggggccaccaggagcccaagggcctccagga
ccacagggccctccagggatgctaggtcaagggatgcccggcccccatggaaaaccaggc
cctcctggtccccaagggtatcctgggataggaaaacccggaatgccgggaatgcccggt
aaacctggtggaggcggccagcctggtccgaagggcgaccttggtcctggtggtgatgta
ggaccaatggggatgcctggggggccaggtcttccagggccaccaggcctgccaggcatc
gggaagccagggggtcagggactgcctgggcagcctgggcctcgaggggagcctggacac
aagggcatacctggactgcctggtcttcctgggcccaagggagacaaagggattggcttg
ccaggattgccaggtttgaaaggacctggtggacctcctgggcctcctggtcaagggggt
ttgccaggggttggaaaaccaggtctgaatggactaccaggattgcccgggggggcagga
aaaccaggcccacctggagaaggaggacttgctggtccaccaggtgaagggggagaacca
ggaccacctgggctaccaggtattggcaagcccgggcatgatggtttgccaggacaacca
gggttcccaggcggtaaaggggaatcaggcccaccaggtttgccagggggctcaggccta
cctggttacggaaagccaggatatcctggaccaaaaggagacaaaggacatggaggtttt
tctggagctccaggcccaaagggtgacaaaggtcatggaggtctcccagggcaggaaggc
cttcctggacccaacgggccaccgggcctgcccggtaccattgggccacctgggggtctt
ggtttcccaggtccgaagggagaaggtggcaatggagggccaaagggtctgccaggtcct
aaaggtgagccagggcctcccgggcttcctggacagggtgggtatcctggagagggtggt
caaccaggaccgagaggtataccagggccactgggtccgaaaggggataacggccacaaa
gggttacctggcctccctggagctcctggaatgcccggttcaaggggagaaggtggaatg
cccggagaaaaaggtcaccagggacccaagggaatacctggaaattttggtccaggtggg
ccacttggtcctcccggtcttcccgggccaaaaggcgagcttggtccaccagggaaacct
ggctaccccggcgaaggtaaacctggtgttccaggcgctttagggccccaagggaaacct
ggtaacggtggaccccctggtcagcctggacaaccaggacaacctggtccccctggccca
cccggaccccccacccaaacacctggtcttggtgaaatcctccctgagctgggtcctggt
ctggacggtcttaaacaaggcggttacaagaaaccgaagaatggaggggacaggaacggc
ctggagatgccagcattcacggctcagctcaccaatcctttcccccccgtaggctcccct
gtggtctttgacaagctcctgtacaatggccatcaggactacaatccccaaaccggcgtc
ttcagctgtaccataccgggaatctattactttgcttaccacgtccactgcaaaggagcg
aatgtgtgggtggcgctggtcaagaacaatgagcctgtgatgtacacatatgatgagtac
aaaaagggcagcctggaccaggcgtcagggagcgctgtgctccctttacagcaaggagac
actgtgcatgtacagcttccatctgaccaggcagcaggactttatgccggtcaatatgtc
cactcttcattctccggatatttattgtacccaatgtaa
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