Oncorhynchus nerka (sockeye salmon): 115122381
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Entry
115122381 CDS
T07952
Symbol
ocln
Name
(RefSeq) occludin isoform X1
KO
K06088
occludin
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03272
Virion - Hepatitis viruses
one04514
Cell adhesion molecules
one04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
115122381 (ocln)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
115122381 (ocln)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
115122381 (ocln)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
one01009
]
115122381 (ocln)
Protein phosphatases and associated proteins [BR:
one01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
115122381 (ocln)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Occludin_ELL
MARVEL
Oxidored_q3
Wzy_C_2
DUF2381
NnrU
Motif
Other DBs
NCBI-GeneID:
115122381
NCBI-ProteinID:
XP_029507447
LinkDB
All DBs
Position
Unknown
AA seq
504 aa
AA seq
DB search
MPSHNKRTSPSYHPGSRRHEHRHKHSEHVSNPAYSFYPEEELLHFYRWTSPPGVMKIISI
IIIIMCVAIFACVASTLAWDYDMSMMGMSGGIGAGMGIGGGGYGGSYGSSYGGGSSYGSG
IGGGSSYGGGSYGSGTQTDPLAGKGFIIAIAAITFIAVLIIFILVVSRQNASRSPKFYLG
AIIVSAILAILMIIATIVYLVAVNPTAQSSGSVYYNQIIQLCSQYQNQNQAQGIFINQYL
YHYCVVEPQEVGTIFINQYLCHYCVVEPQEVIAIILGILVFVGLIILLVFAVKTRQKIRR
WGPDRILWEETKVISNSLRTHTIGEWVNNVSGQPDTLVNEYNDKVGGSRNFLDQLPDHRP
LYLPGSSDITSSLGGLKSKLRDYDTGAESGGEDLDEIDFNSEFSAIMNEQERLDYKREFD
RDHLEYKELQAELDDLNMGLADLDKELDRQPEGSPQFLDAMDKYTRMKNMKKSSDYQLKK
KRCKHLKAKLSHIKRKVSEYDRRP
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgccctctcacaacaaacgcacctctccttcctaccatcccggcagcagacgccatgaa
cacaggcacaagcatagcgagcatgtctccaacccagcctactctttctacccagaggag
gagctcctccacttctaccgctggacctctcctccaggggtgatgaagatcatctccatc
atcatcatcatcatgtgcgtagcgatcttcgcctgcgtggcgtctacgctcgcctgggac
tacgacatgagcatgatgggaatgagcggcggcatcggcgccgggatgggcatcggaggc
ggaggatacggtgggagctacggcagtagttacggcggtggctcgtcctacggcagcggt
atcggcggaggctcgtcctacggaggcggtagctacggaagcgggacccagactgacccc
ctggcggggaagggcttcatcattgccatagcagccatcaccttcatcgccgtgctcatc
atcttcatcctagtggtgtcgcggcagaacgcgtcccgctcgccaaagttctacctgggg
gccatcatcgtgtcggccatcttggcgatactaatgatcatcgctactatagtctacctg
gtggcagtgaaccccacagcccagtcctcagggtccgtctactacaaccagatcatacag
ctgtgttcccagtaccagaatcagaaccaagcccagggcatcttcatcaaccagtacctc
taccattactgcgtggtggaacctcaggaggtaggtactatcttcatcaaccagtacctc
tgccattactgcgtggtggaacctcaggaggtcatagccatcatcctgggaatcttggta
ttcgtgggtctgatcatcctgctggtgtttgctgtgaagacgcgtcagaagatcagacgt
tggggcccagacagaatcctctgggaggagaccaaggttatcagcaacagcctgcgcaca
cacaccatcggagagtgggtgaataatgtgtctggtcagccggacactctggtgaatgaa
tacaacgacaaggtggggggctccaggaacttcctggaccagctgccagaccacagacct
ctgtatctgcctgggagctcagacataacaagttcgttgggaggactgaagagcaagctg
agggactacgacactggtgcagaatcaggaggagaggatttggacgagatcgactttaac
tccgagttctctgccatcatgaatgagcaggagcgtctggactacaagagggagtttgac
cgggaccatctagagtacaaagagctccaggctgagctggatgacctcaacatgggcctg
gctgacctggacaaggaactggacagacaaccagagggcagcccacagttcctggatgct
atggataagtacacccggatgaagaatatgaagaagtcctcagactatcagctgaagaag
aagaggtgcaagcatctgaaggccaagctgtctcacatcaagaggaaggtcagcgagtat
gaccgcagaccctga
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