Oncorhynchus nerka (sockeye salmon): 115122462
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Entry
115122462 CDS
T07952
Name
(RefSeq) calpain-2 catalytic subunit-like
KO
K03853
calpain-2 [EC:
3.4.22.53
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04141
Protein processing in endoplasmic reticulum
one04210
Apoptosis
one04217
Necroptosis
one04218
Cellular senescence
one04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
115122462
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
115122462
04217 Necroptosis
115122462
04218 Cellular senescence
115122462
09144 Cellular community - eukaryotes
04510 Focal adhesion
115122462
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
one01002
]
115122462
Enzymes [BR:
one01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.53 calpain-2
115122462
Peptidases and inhibitors [BR:
one01002
]
Cysteine peptidases
Family C2: calpain family
115122462
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_8
EF-hand_7
EF-hand_1
CAPN13-like_C_EFh
Motif
Other DBs
NCBI-GeneID:
115122462
NCBI-ProteinID:
XP_029507525
LinkDB
All DBs
Position
Unknown
AA seq
588 aa
AA seq
DB search
HTHTHQTCVSSLFSPGDCWLLAAIASLTLNEDVMARVVPEGQGFGRGEYAGIFHFQFWQF
GEWVDVVIDDRLPTKDGKLLFVHSAEGSEFWSALLEKAYAKVNGCYEALSGGSTTEGFED
FTGGIAENYDLKKAPSDLFQIIRKALASGALLGCSIDITSQADSEAVTYQKLVKGHAYSL
TGAMEVTSSEWNSVDFSERDVVKADDGEFWMSYTDFMKNYHRLEICTLTPDTLTSDDTKQ
WSVTNYDGAWRKGSTAGGCRNNAHTFWMNPQFKINLEEEDDDPGDNEVGCSFVVGLIQKN
RRRMRKVGEDMHTIGFAIYEVPQQFHGQREVHLDKNYFLTHAQKARSETFVNLREVSTRF
KLPPGEYLIVPSTFEADLNGDFCLRVFSEKQAQFHHCEDRVEAKLENDTVSEAEVDAGFR
GLFAKLAGKDMEISAAELQSILNKIIAKRTDIKTDGFSLETARVMVNLMDDNGNGQLGLG
EFATLWKKIQRYLVRFYSVIITHLLSRLSIIWDPTVIFYLSPGFSLNNAIHQILVVRYGE
ADMTIDFDNFVACIMRLEMMFKVFMKIDTANTGSIELDIHQWLSFTMI
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
cacacacacacacaccaaacatgtgtctcctctctgttctctccaggtgactgctggctc
ctggcagccatcgcctctctgaccctgaatgaagatgtgatggcccgggtcgttcctgaa
ggacaaggatttggacgtggagagtacgctgggatctttcacttccagttctggcagttt
ggtgagtgggtggacgtggtgattgacgaccggctgccaacgaaggatggaaagctgctg
tttgttcactcagccgagggctctgagttctggagcgccctgctggagaaggcctacgcc
aaggtgaatggatgctatgaggctctgtcaggtggctccaccactgagggctttgaggac
ttcacaggagggatagcagagaactatgacctgaagaaggctccctccgacctgttccag
atcatcaggaaagccctggcctctggagctctgctgggctgctccatcgacatcaccagt
caagcagactcggaggccgtcacctatcagaagctggtgaaaggacacgcctactctctg
accggggctatggaggtaacctcctcggagtggaacagcgttgatttttctgagcgtgac
gttgtgaaagcagacgatggagagttctggatgtcgtacacagacttcatgaagaattac
catcgtctggagatctgcactctgacccctgacaccctgacctccgatgatacaaaacaa
tggagtgtgaccaactatgacggggcctggaggaaaggatcgaccgcaggaggatgcagg
aataatgcccacacgttctggatgaatccccagttcaagatcaatctggaggaagaggat
gacgacccgggggataatgaggtgggctgtagcttcgtggtgggactcatccagaagaac
agaagacggatgaggaaagtaggagaggacatgcacaccatcggattcgccatctatgag
gtaccacaacagttccacggccagagggaggtccacctggataagaactatttcctgacc
catgcccagaaggcccgctctgagacctttgtcaacctgagagaggtcagcacccgcttc
aaactgccccctggagaatacctcatcgtcccctccaccttcgaggccgacctgaacggg
gacttctgcctacgagtgttctcagagaaacaggcccaatttcaccactgtgaagaccgt
gtagaggctaaactagaaaatgacactgtgtctgaagcggaggttgatgctgggttcaga
ggtctgttcgccaagctagctggaaaagacatggagatttcagcagctgagctccagtcg
attctcaacaaaatcatagctaaacgaacggacataaagacggacggtttcagcctagaa
acagccagagtcatggtcaatctcatggacgacaacggtaacggacaactggggctggga
gaatttgcgacactgtggaagaagatccagagatacttggtgaggttctattcagttatt
attactcatcttttatcaaggctgtcaatcatttgggaccccacagtaatattctatctc
tcaccaggtttcagtctgaacaacgccatccaccagattctggttgttcggtatggagag
gctgacatgaccatcgactttgataactttgtcgcctgcatcatgcggctggagatgatg
ttcaaggtcttcatgaagatcgacacggctaatactggctctattgaattggatatccat
cagtggttgtcatttaccatgatctag
DBGET
integrated database retrieval system