Oncorhynchus nerka (sockeye salmon): 115122512
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Entry
115122512 CDS
T07952
Symbol
dcaf10
Name
(RefSeq) DDB1- and CUL4-associated factor 10 isoform X1
KO
K11802
DDB1- and CUL4-associated factor 10
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
one04121
]
115122512 (dcaf10)
Ubiquitin system [BR:
one04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
115122512 (dcaf10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WDR55
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_EML
RMC1_N
Beta-prop_VPS8
WD40_like
NBCH_WD40
Beta-prop_DCAF4
Beta-prop_TEP1_C
Beta-prop_DCAF12
MIOS_WD40
Motif
Other DBs
NCBI-GeneID:
115122512
NCBI-ProteinID:
XP_029507580
LinkDB
All DBs
Position
Unknown
AA seq
542 aa
AA seq
DB search
MSSEQQSDSVDPDESQDTSSSRVSDKEQDPQTDDSADEGKTPARPPQSSREESSLHPRSS
RADSAAAQDNPRCQPNVQGASGQGRGTSMAGPGSVETSSNSLFSMLQSRTIRRGLFVDPS
RDNFRTMTNLYSSMSPAADSVNLSTQTHGAVFNLEYSPDGSVLTVACEQTEVLLFDPISS
KHIKTLVEAHEDCVNNIRFLDDRLFATCSDDTTIALWDLRKLNSKVCSLHGHASWVKNIE
YDTNTRLLVTSGFDGNVITWDTNRFTEDGCPHKKFFHTRYLMRMRLTPDCSKMLISTSSG
YLLILHDLDLTQSLEVGSYRMLRARRTPLSSDGSASASRSSGSPRQGNDSSKIHPHREGL
SPRNSLEVLTPEIPGERDRGNCITSLQLHPKGWAALIRCSSNMDDQEVSHLTPQNPQEWT
CVYEFQDGSPTRPPVSPRCSLRLTHYIEEANVGRGYIKELCFSPDGRLICSPYGRYGVRL
LSFDENCMELSDCLPVQTSCLREVRSIYSHSDVVLTTKFSPTHCQLASGCLSGRVALYQP
RF
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgagctcggagcagcagagcgacagcgtggacccggacgagtcgcaggacacgtccagc
agccgggtgtcggacaaggaacaggacccgcagacagatgattccgccgatgaaggcaag
acaccggcgcgtcctccgcagagcagccgagaggagagtagtcttcacccgagaagctcc
agggcggattctgcagccgcgcaggacaatccccggtgtcagccgaatgtacaaggcgcc
tcggggcaagggaggggtacctctatggctggccctggttcggttgagactagctccaac
agcctgttctccatgctacagagcaggactataaggagagggctgttcgtggatccatct
agagataactttaggacaatgacgaacttgtattcttccatgagtccggctgcagactcg
gtcaatctcagtacccaaactcatggcgcagtgttcaatttggaatactcccccgacggg
tctgtcctgacagtggcctgtgaacagacggaggttctcctgttcgatcccatctcttcc
aagcacatcaagaccctggtggaggctcatgaagactgtgtcaataacatcaggtttctg
gacgaccgtttgtttgccacatgttctgatgacaccaccatagctctgtgggacctgagg
aagctcaactctaaagtgtgctctctgcacggtcacgccagctgggtcaagaacatagag
tacgacaccaacacacgactcctcgtcacctctggctttgacggaaacgtcatcacctgg
gacaccaacaggtttacagaggatggctgcccccacaagaagtttttccacacgcgctac
ctgatgagaatgcgtctgactccagactgttccaagatgttgatctccacgtcatctggc
tacctgctgatccttcacgacctggacctcacacagtctctggaggtgggcagctaccgt
atgctgcgggccagacgcacccccctcagctcagatggctcagcgtctgcgtcgaggtca
agtggatctcctcgacagggtaacgactccagcaagatccaccctcacagagaaggtctc
tcccccaggaatagtttggaggtgttgactccagagatcccaggagagagggacaggggg
aactgcatcacctctctccagcttcaccctaaaggctgggctgccctcatacgttgctcc
tccaacatggatgaccaggaggtgagtcacctgaccccccaaaacccccaggagtggaca
tgtgtgtatgagttccaggatggctcccccacacgtccccccgtctcaccgcgctgctct
ctacgtctgacccactacatcgaggaggctaacgtggggaggggctacatcaaggagttg
tgcttcagtcctgacgggcggctcatctgctccccctatggcaggtacggagtacgactg
ctgtccttcgacgagaactgtatggagctgtctgactgccttcccgtccagaccagctgt
ctccgagaggtgcggtccatctactcccacagtgatgtggtcctcaccaccaagttctcc
ccaacccactgccagctggcgtcaggctgtctcagtggccgcgtcgccttataccagccc
aggttctaa
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