Oncorhynchus nerka (sockeye salmon): 115122531
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Entry
115122531 CDS
T07952
Name
(RefSeq) valine--tRNA ligase-like isoform X1
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
115122531
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
one01007
]
115122531
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
one03016
]
115122531
Enzymes [BR:
one01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
115122531
Amino acid related enzymes [BR:
one01007
]
Aminoacyl-tRNA synthetase
Class I (U)
115122531
Transfer RNA biogenesis [BR:
one03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
115122531
Prokaryotic type
115122531
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
GST_C
tRNA-synt_1_2
GST_C_2
Arc1p_N_like
GST_C_3
Val_tRNA-synt_C
tRNA-synt_1e
Jag_N
Motif
Other DBs
NCBI-GeneID:
115122531
NCBI-ProteinID:
XP_029507600
LinkDB
All DBs
Position
Unknown
AA seq
1317 aa
AA seq
DB search
MNLTKASFEPNMCATLRKTADYLHCLSGTHELTSLSYSFKGMASLYISHHPDDFRSLMAL
VAAEFCPSRPCTLLEDPPASLALCSRPSLVLGSGGGEVLSGASAVAWYLASQGKRIGSNA
KQESQVWQWLSFADNELTPVSCAVVFPLLGVMGVDKKLQQSSHAEMMRVLNVLDKNLEPR
TFLVGNSLTLADIAVATAALLPFKYALEPSNRRALTNVTRWFLTCVNQPQFVKVLGQISL
CEKMVPVTPKPSVAPVPAANANPTADANATNGKPKTEAQLKKEAKNREKLEKFQQKKKME
EKKKQEKKLAPPTEKKAKPEKKDLGVISYDVPTPPGEKKDVLSPLPDSYSPQYVEAAWYS
WWEKQGYFKPEYGRKSISEPNPRGVFMMCIPPPNVTGSLHLGHALTNAIQDCLTRWHRMR
GETTLWNPGCDHAGIATQVVVEKKLMRERGMSRHDLGRDQFIQEVWKWKNEKGDHIYHQL
KKLGSSLDWDRACFTMDPKLSNAVQEAFIRLHEDGVIYRSKRLVNWSCTLNSAISDIEVD
KKELTGRTLLPVPGYKDKVEFGVLISFSYKIEGSDEEVIVATTRIETMLGDSAVAVHPAD
PRYQHLKGKMVLHPFCDRMMPIVFDEFVDINFGTGAVKITPAHDHNDYEVGNRHNLAFIN
ILDENGLLINVPAPFLGMKRFEARKAVLQALKDRGQFKESKDNPMVVPVCSRSKDIVEPL
LKPQWYVDCADMGKQAADSVREGRLKIIPDHHHKTWFNWLDNIRDWCISRQLWWGHRIPA
YFVTVNDPSVTPGEDMDGHYWVSGRTEEDARDKAAKRFNVSTDKVTLRQDEDVLDTWFSS
GIFPFSIFGWPNETQDLSVFYPGTLLETGHDILFFWVARMVMMGLKLTGKLPFKEVYLHA
VVRDAHGRKMSKSLGNVIDPLDVITGISLEGLYTQLQDSNLDPVEVEKAKQGQQSDYPTG
IPECGTDALRFTLCAYTSQGRDINMDVNRILGYRNFCNKLWNAVKFAMRTLGGNFVPSEK
AQLCGEESVSDRWILSRLCSAVGLCNAGFQAYDFPAITTAIYNFWLYELCDIYLESVKPV
FSRAEEDSGSQSQAVVCRQTLFTCLETGLRLLAPIMPFVGEELYQRLPRRRSQDDRSSIH
VMPYPETEVFCWHSEDVDRQMEFVMTVVRTIRSLRADYKLTKTRADCYLQCIDSETMSLV
EQYSLQIQTLSLSQTIQPVPATGAVPEGCAVAIASDRCTVHLMLKGLIDLEKEVAKLTMK
KGELEKTMDKLRKKMDKSDYKEKVPVKVQDLDAEKLRQSQTELEKATEAIDNYKRMV
NT seq
3954 nt
NT seq
+upstream
nt +downstream
nt
atgaatctgaccaaagcgtccttcgaaccaaacatgtgcgcaacattgcgtaagacggcc
gactacttacactgcttatctggaactcatgagttgacgtccctttcttattcattcaaa
gggatggcttcgctctacatctcccaccaccctgatgacttcaggagcctcatggccctg
gtcgctgcagagttctgcccctctcggccctgcacactcctagaggaccctcctgcctcc
ctggccctgtgctctcgccccagcctggtgctgggctctgggggaggtgaggtgctctct
ggggccagtgctgttgcatggtacctagcctctcaggggaagaggatagggtcgaatgct
aagcaggagagccaggtgtggcagtggctcagctttgcagacaatgaactgactcctgtg
tcctgtgctgtggtgttcccactgctgggggtgatgggagtggataagaagcttcagcag
agttctcatgctgagatgatgcgcgtgctaaacgttctagataagaacctggagcctaga
acattcctggtgggaaacagcctcactctggccgacatcgctgtggcaactgcagcactc
ctgcccttcaaatacgccttggagccatccaacaggagagccctgacgaacgtgaccaga
tggtttctgacctgtgtcaaccagcctcagtttgttaaggtcctgggacagatctctctg
tgtgagaagatggtgcccgtcacacccaaacccagcgttgctcctgttcctgctgctaac
gctaatccaactgctgatgccaacgctaccaatggcaaaccaaagacagaagctcagctg
aagaaggaggctaaaaacagagagaagctggagaagttccaacagaagaagaagatggag
gagaagaaaaagcaagaaaagaaactggcacccccgacagagaaaaaggccaaaccagag
aagaaggacctgggagtgatctcatacgacgtccccacccctcctggagagaaaaaagac
gtcctgagccccctgccagactcgtacagtcctcagtacgtggaggcagcctggtactcc
tggtgggagaagcagggatacttcaaacctgagtacgggcggaagagtatcagtgagcct
aacccccgtggagtgttcatgatgtgtatccctccgcccaatgtgacgggatctcttcac
ttaggccatgccctaaccaacgccatccaggactgtctgaccagatggcaccgtatgcgt
ggcgagacgaccctgtggaacccaggctgtgaccatgcgggcatcgccacccaggtggtg
gtggagaaaaaactgatgagggagaggggcatgagccgtcatgacctggggagagaccag
ttcatccaagaggtctggaagtggaagaacgagaagggagaccatatctaccaccagctg
aagaagctgggttcctctctggactgggacagagcctgcttcaccatggaccctaaactg
tccaatgcagtccaggaggcgttcattcgtctgcatgaggacggcgtgatctacaggagc
aagaggctggtcaactggtcatgcaccctcaactctgccatctcggatatagaggtggat
aagaaggagctgactggcaggactctgctgcccgtgcctggctacaaggacaaagtggag
tttggagtactgatctccttctcctacaagatagagggatcagatgaggaggtgattgtg
gcgaccactcgtatagagaccatgctgggagattctgctgtggccgtccaccctgccgac
cccagataccagcaccttaaagggaagatggtgcttcatcccttctgtgacaggatgatg
cccattgtgtttgatgagtttgtggacatcaactttggaactggtgctgtgaagatcacc
ccagcccatgaccataatgattatgaggttggaaacagacacaacctggccttcatcaac
atcctggatgagaacggcctgctcatcaacgtgccggctccattcttgggtatgaaacgt
ttcgaagcaaggaaggctgtgctacaggctctgaaggacagaggccagttcaaggagtcc
aaagacaaccccatggtggtgcctgtctgcagtcgttctaaggacatagtggagcccctg
ctgaagcctcagtggtatgtggactgtgctgacatgggcaagcaggcagctgactcggtc
cgggagggaagactcaaaatcatcccagaccaccaccataagacctggttcaactggttg
gacaacatcagggactggtgtatctctcgtcagctgtggtggggtcacaggatcccagcc
tactttgtcactgtgaacgacccttcagtcacaccaggagaggacatggatggtcattac
tgggtgagtgggaggacagaggaggacgccagagataaagctgccaagcgcttcaacgtc
tccactgacaaggtcaccctcagacaggatgaggatgtcctggatacatggttctcctct
ggtattttccccttctccatcttcggctggcccaatgagacccaggacctgagtgtgttc
tatccaggcaccctgctggagacgggtcatgacatcctgttcttctgggtggcccgcatg
gtgatgatgggcctcaaactcaccggcaagctgcccttcaaagaggtgtacctccatgcg
gtggtcagggacgcccacgggaggaagatgagcaaatctctggggaacgtcatcgacccc
ctggacgtcatcacaggcatctctctggagggtctgtacacccagctgcaggacagtaat
ctggacccagtagaggtagagaaggccaagcagggacagcagtctgactaccccactggt
atcccagagtgtggcacagatgccctccgcttcaccctgtgtgcctacaccagccaaggc
agggacattaacatggatgtgaatcgtatccttggttaccgtaatttctgtaacaagctg
tggaatgctgtgaagtttgccatgagaacgctgggaggcaactttgttccttcagagaaa
gcccagctgtgtggggaggagagcgtgtcagaccggtggattctgtcccgtctgtgttct
gctgtgggtctgtgtaatgcagggttccaggcctacgacttcccagctatcaccacagcc
atctacaacttctggctctacgagctctgtgacatctatctggagagtgtgaagccagtg
ttctccagggcggaggaagacagtgggtctcagagccaggctgtcgtctgcagacagacc
ctgttcacctgcctggagaccggcctgcgtctcctagctcccataatgcccttcgtgggc
gaggagctctaccagaggttgccacggcgacgatcccaggatgaccgctctagtatccat
gtcatgccctatcctgagactgaggtgttctgctggcatagtgaggacgtggaccgtcag
atggagtttgtgatgaccgtggtccgtaccatccgttcactcagggccgactacaaactg
accaagacacgcgccgattgctacctccagtgtatagacagtgagacgatgtctctggtg
gagcagtacagtctgcagatccagaccctgtctctatcccagaccatccagcccgtccca
gccaccggggccgtcccagagggctgtgctgtggctattgcctccgacaggtgcaccgtc
cacctcatgctcaagggtctgatagacttggagaaggaggtggccaagctgactatgaag
aagggagagctggagaaaacgatggataaactgagaaaaaagatggataagagtgactac
aaggagaaggtgcctgttaaagtacaggatctggacgctgagaagctgcgtcagagccag
acggagctggagaaagcaacggaagccatagacaactacaaaagaatggtgtaa
DBGET
integrated database retrieval system
