Oncorhynchus nerka (sockeye salmon): 115122550
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Entry
115122550 CDS
T07952
Name
(RefSeq) matrin-3-like isoform X1
KO
K13213
matrin 3
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
one03041
]
115122550
Spliceosome [BR:
one03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
115122550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
115122550
NCBI-ProteinID:
XP_029507617
LinkDB
All DBs
Position
Unknown
AA seq
1193 aa
AA seq
DB search
MSQKIPSDSSQKGFAVGRGLLAAAETLNFSMNEQCSDSLHHGSTSRQLHSMSSGMGGGEG
DHDPQLSRRGGGHIGNSMKLFASLGLSPADLDVLAQIPEENISVESLPQLIMQLKNRKVD
SDRRMAGNSRGDLSGLSSEPSYRASRDNWDDMRAGRLGGSMGQASAHAQQGDLGYNSIQD
TPAGRYELDYGHGSGGRDPGWYSDLSRDRYSGMGMGPPSAADSVFMTRRMGSPSQGKVQD
FLGVIPHMFPHVCSLCDFDVHSTMEWNQHTDGLRHTENQRLLLQMYPEWDPHMATSRGGG
SHLQETTNQSASLLGPIPMGGGQQAGGGRMSSGWGGGAGSNVGSGKPHQHSMALKQIRSK
VVVAIYDRSPLSNKALFALAEPFGTLCEHLVLKNKAFLEMETHKEARDVVSYYQQNPALL
HGKQITLYLSKELLVIQKDRRTERINREAKQGKEPVAANQSQVVFFSNLPRENEKKQELL
TIARRFGIVKKHLFLTEERSSSKAFVQLGSAEDAEMLVKYYTLNPLTIQGKSVRLNICTK
YKTLNVNNRSNKLMDDKRRRRSSSTGPKDKSSSSKSTKSSSSSSSKAKEDRKEPPKGEDG
DAGREGEGSGRDGVGSGDVVAGVMEGDKAEECEGEGDQDSRDVGPSADNAEAVTEDPETA
ANTSLESQEEKEPAPDSDNVPSTAKGLSSSDVTEKAEGSEVEEGTVPGAEETAEGEPESE
QMETEATTDETEVKVDSPSAEPAESSEMHEEQLPADQEEGSMEQDFPENMDDFVTLDELA
EDEDLERQDSSSKEKYSSSGSSKKIGGLRVVNVVGFKRAYGFLNEILALAKPFGTVVQHL
VLDVRPEAFLQLTSEEEAKAMVNFYSGNVTPTVCGKSVKIYHSQTYATIQSGRVVYVGQI
PHFKSSDASLLKIAEPFGKVRRYFLNRSRNECFIEMERGEDAERMADTYKDTPPKLEGKR
LTVYVSRKYKQLKYGHRPPAPDSEEKEKRSSKRERSGSETSSHRSSAAKSSAKQDEEPPV
KKSREETASSSTDEPDKEDEEKMVEAPTEQSEVEVRKEEEVQGEYGQPSENSAVHEIDTD
MNIKMEENDAPISILSVRSVEENGETACTPSQAEGKLSSTSPVPLGPYEPNSPVGVEYVK
MGYYCRVCFLFYSNEETAKKVHCSSQSHYQKLKKHLEKEKAKAQSSTGLKTPV
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagaagattccatctgatagctctcagaaaggctttgctgtgggacgcgggctc
ctggctgctgctgagaccctcaacttcagcatgaatgaacagtgttcagacagcctccat
catggctcaacctccagacagttgcacagcatgtcctcaggtatgggtggtggtgagggc
gaccatgacccccagctgtcccgtcgtggtggcggccacattggcaactccatgaagcta
tttgccagcttgggcctgtcgcccgcagacctagacgtgctggcacagatcccagaagaa
aacattagtgtggagtccttgcctcaacttataatgcagcttaagaaccggaaggtggat
tctgacagacgcatggcaggcaactctagaggggacctgtccgggctctcctctgagccc
tcctacagagccagcagagacaactgggatgacatgcgtgctggaagactgggtggttcc
atggggcaagcttcggcccacgctcagcaaggagacttgggctacaattccatccaagac
actccagctggaaggtatgaactcgactatggccacggcagtggcggaagagatccaggg
tggtattcagatctttcccgtgatcgctacagcggtatgggcatgggtcccccttcagcg
gcagacagtgtctttatgaccaggagaatgggatccccgtcccaaggcaaagtgcaggac
ttcttaggagttatacctcacatgtttccccatgtgtgctctctttgtgattttgacgtg
cactctaccatggagtggaaccagcacacagatggattacgccatacagaaaaccagagg
ctcctcctgcaaatgtacccagaatgggatccacacatggccacaagcagaggcggtggg
tctcatctacaggagaccaccaatcaatcagccagtctcctgggaccaatccccatgggc
ggtgggcagcaggctggaggaggccgcatgagctccggctggggtggtggtgctggatct
aatgttggatcaggcaagccacatcaacactctatggcacttaagcagatcagaagcaaa
gtagtggtggccatatatgacaggagtcctctgtctaacaaagccctgttcgccttggct
gaaccctttggaactctctgtgaacacttggttctgaagaacaaggcctttttagaaatg
gagactcataaggaagctagggatgtggtgagctactaccagcagaacccagcgctgttg
catgggaaacaaatcaccttatatctgtccaaagaactcctggtgattcagaaagaccgc
agaactgagagaatcaaccgggaggcgaaacaaggcaaagagccggtggcggcgaaccaa
tcgcaggtagtcttcttctccaacttgccgcgtgagaacgagaagaagcaggaactcctc
accatcgcgaggcgcttcggcatcgtaaagaaacacttgtttctaactgaagagcgttcg
tcttccaaggcttttgttcagctggggtctgcggaggatgctgagatgttggtgaagtac
tacactctgaatccactgaccatccagggaaagtctgtccgtttaaacatctgtaccaag
tacaagaccttgaatgtgaataatcgctccaacaaactgatggatgacaagagaaggaga
aggagcagtagtactggacccaaagacaaatcttcctcctccaagagcaccaaatcttcc
tcttcttctagcagcaaagccaaagaggacaggaaggaaccaccaaaaggagaggacggc
gatgcagggagagagggagaggggtcagggagagacggagtggggtcaggggatgtggtg
gctggtgtgatggagggagataaagctgaggagtgtgaaggagagggagaccaggattca
cgtgatgttgggccgtcagcggacaatgctgaagccgtgacggaagacccagagactgct
gccaacaccagtctggaatcgcaggaggagaaggaacctgctccggactccgacaatgtt
ccgagcactgccaagggtctgagcagtagtgatgtcacagagaaggctgaggggtcagag
gtggaggaggggactgtgcctggtgcagaggagacagcagagggagagcctgagagtgaa
cagatggaaactgaagccactacagatgagacagaggtcaaggttgactcgccatcggca
gagccagcagagagctcagagatgcatgaagaacagctacctgcagatcaggaggagggc
agcatggagcaggacttcccagagaacatggatgactttgtgactctggatgagctggca
gaggacgaggacttggagagacaggactcgtcatccaaagaaaagtactcgtcttcagga
agctctaagaaaattgggggattgagagtggtcaacgttgtgggatttaaacgagcctat
ggtttcctgaacgagatcttggccctggccaaacccttcggtactgtagttcagcacctg
gtgcttgacgtgagacccgaggcctttctgcaactcacttcggaagaagaggccaaagca
atggtcaatttctacagtgggaatgtaacaccgactgtgtgtgggaagtctgtgaaaatc
taccattcacagacatacgctaccattcagagtgggagagtggtatacgtgggacagatt
ccccacttcaaatcctccgacgcctccctcctgaaaatcgctgaaccgttcggcaaagtg
agacgctattttctgaacagatctcgcaacgagtgtttcattgaaatggaacgtggagag
gatgctgagagaatggctgacacctacaaggacacgccccctaaattggaaggcaagcgg
ctaacggtgtacgtgagcaggaagtacaaacagctcaaatacggacaccgaccaccagcc
cctgactctgaggagaaggagaagaggtcgtcgaagagggagcgatcaggcagtgaaacg
agctcccacaggagctccgcagccaaaagctcagccaaacaggatgaagaacctccagtc
aagaagtccagagaggagacggcatcttcatcaacagacgagcctgacaaagaagacgag
gagaagatggtggaggcgcccactgagcagagtgaggtagaggttaggaaggaggaggag
gtccagggagaatatggtcaaccctctgagaactcggctgtacacgaaatagacactgac
atgaacatcaaaatggaggaaaacgacgcgcccatttccatcctgagtgtgaggagcgtt
gaggagaatggagagactgcctgcacaccatctcaggctgaggggaagctttcatcaacc
agcccggttcctctggggccgtatgagcctaacagcccagtgggtgttgaatatgtgaag
atggggtactactgtagagtctgtttcctgttctattccaatgaggagacggccaagaag
gttcactgcagcagtcaatctcactaccaaaaactcaagaaacatctggaaaaagagaag
gccaaagctcaaagtagcacagggttgaagactcccgtgtag
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integrated database retrieval system
