Oncorhynchus nerka (sockeye salmon): 115122602
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Entry
115122602 CDS
T07952
Name
(RefSeq) LOW QUALITY PROTEIN: threonine--tRNA ligase, cytoplasmic-like
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
115122602
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
one01007
]
115122602
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
one03016
]
115122602
Enzymes [BR:
one01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
115122602
Amino acid related enzymes [BR:
one01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
115122602
Transfer RNA biogenesis [BR:
one03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
115122602
Prokaryotic type
115122602
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
TGS
tRNA_SAD
Motif
Other DBs
NCBI-GeneID:
115122602
NCBI-ProteinID:
XP_029507680
LinkDB
All DBs
Position
Unknown
AA seq
724 aa
AA seq
DB search
MAEKSMAEQMEELKVDDGKKGGGAKDGEKKKKKVAAGDAGGKTELSPPPGYMEERLSLYT
KLKEEHDALMAERAEKDSKSIKVTLPDGKVVEAESWKTTPYQVAAGISQGLADATVIAKV
NSSVWDLDRPLEENCSLQLLKFDDDEAKAVYWHSSAHIMGEAMERVYGGCLCYGPPIENG
FYYDMFLDQEGVSSNDFPCLENLCKKIIKEKQPFERLEIKKETLLEMFKYNKFKCRILNE
KVTTPTTTVYRCGPLIDLCRGPHVRHTGKIKALKIHKNSSTYWEGKADMETLQRIYGISF
PDPKMLKEWERFQEEAKNRDHRKLGREQDLFFFHDLSPGSCFFLPKGSYIYNSLVDFIRS
EYRKRGFQEVVTPNIYNSKLWQRTSGATWAHDSXNMFSFEVEKEVFATSKTYDGPGHCLM
FDHRPRSWRELPLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCTMDQIEEEIKGC
LDFLRTVYECFGFSFKLNLSTRPEKFLGEPAVWDQAEKQLENSLNEFGEKWVLNPGDGAF
YGPKIDIQIKDAIGRYHQCATIQLDFQLPIRFNLTFVSHDGDDKQRPVIIHRAILGSVER
MIAILTENYGGKWPLWLSPRQVMVVPVGPTLDDYAQKIRDDFHRGGLMTDVDCDASCTLN
KKIRNAQLAQYNFILVVGEKEKTSETVNVRTRDNKVHGERSVNECMERLKQLKASRSRNA
EEEF
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaaagagcatggcggagcaaatggaggagttgaaagttgacgacgggaaaaag
ggaggaggagccaaagatggagagaagaagaagaagaaggtggcagcgggagacgctggt
gggaagacagagctgtcccctcctcccgggtacatggaggagcgtctgtccctctacact
aaactgaaggaggagcatgatgctctgatggcagagagggcagagaaggacagtaaatcc
atcaaggtgactctgccagatgggaaggtggtggaggctgagtcctggaagaccacaccc
taccaggtggctgctggcatcagtcagggtctagctgacgccaccgtgatcgctaaggtg
aacagctctgtgtgggacctggaccgacctctagaggaaaactgcagtctgcagctactc
aagtttgatgacgacgaggctaaagctgtgtactggcactccagtgcccacataatgggt
gaggcaatggagagggtctacggaggctgcttgtgttacggtccgcccatcgagaacggc
ttctactacgacatgttcctggaccaagagggggtgtccagcaatgacttcccctgcttg
gagaacttgtgtaagaagatcatcaaggagaagcagcccttcgagaggctggagatcaag
aaggagactctcctggagatgttcaagtacaacaaatttaagtgccggatcctgaatgag
aaggtgaccaccccaaccactactgtgtacaggtgtggtccgctgattgacttgtgccga
ggaccccatgtccgacacactggaaagatcaaggccctgaagatccacaagaactcctct
acctactgggagggcaaggccgacatggagactcttcagaggatctacggcatctccttc
cctgatcctaagatgctaaaggagtgggaacgcttccaggaggaggccaagaacagggac
caccgcaaactgggacgggaacaggatctgttcttcttccatgatctgtctccaggcagt
tgtttcttcctgcctaaaggatcctacatctacaacagtctggtggacttcatcaggtct
gagtaccgtaagcgaggcttccaggaggtggtaacccctaacatctataacagtaagctg
tggcaaagaacatcaggggccacatgggcacacgacagtnacaacatgttctccttcgaa
gtggagaaggaggtgtttgccacctcaaaaacctatgacggcccgggacattgtctgatg
tttgaccaccgaccgcggtcctggagggagctgcctctgcgaatggctgacttcggcgtg
ctgcatcgtaacgagctgtctggcgctctgactgggctgacccgggtacgacgcttccag
caggacgatgcccacatcttctgcaccatggaccagattgaggaggagattaagggctgt
ctggacttcctgcgtacagtctacgagtgttttggtttctccttcaaactcaacctgtcc
acccggcctgagaagttcctgggagagcctgcggtctgggatcaggctgagaagcaactg
gagaacagtctgaatgagtttggcgagaagtgggtcctcaaccctggagacggggccttc
tacggaccgaagattgacatccagatcaaggatgctattggtcgataccatcagtgtgcc
accatccagctggacttccagctaccaatccgcttcaacctcacctttgtcagccatgat
ggagacgataagcagaggccagtcatcatccacagagccatcctgggatcagtagagagg
atgattgctatcctcactgagaactacggagggaaatggccgctgtggctgtctcctcgt
caggtgatggtggtacctgtaggacccacattggatgactatgctcagaagatccgtgat
gatttccaccgtggaggtctgatgacagacgtagactgtgatgccagctgcaccctgaac
aagaagatacgcaacgcacagctggcacagtacaacttcatcctggttgtgggagagaag
gagaagaccagcgagacggtgaacgtgcgcacgcgtgacaacaaggtgcacggagagcgc
agcgtcaatgagtgtatggagcgtctcaaacagctgaaggcctcacgcagccgcaacgcg
gaggaggaattctga
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