Oncorhynchus nerka (sockeye salmon): 115122664
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Entry
115122664 CDS
T07952
Name
(RefSeq) transient receptor potential cation channel subfamily M member 1-like
KO
K04976
transient receptor potential cation channel subfamily M member 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
one04040
]
115122664
Ion channels [BR:
one04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
115122664
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSDAT_euk
LSDAT_prok
Ion_trans
Motif
Other DBs
NCBI-GeneID:
115122664
NCBI-ProteinID:
XP_029507759
LinkDB
All DBs
Position
Unknown
AA seq
987 aa
AA seq
DB search
AQKAWIERIFQKRECIHIFPSKDPTRCSCGQLITQHVVIPLGALTNKLSEESHQLVQIDP
PQQERWSVAKNTQTSPTDAFGTIDFQGGGLINKAMYIRVSHDSKPDNLLQLMVKDWQLEL
PNLLISIHGGLQNFDLQPKLKQVLGKGLIKAAVTTGAWIFTGGVSTGVIRHVGDALKDHS
SKSRGKVCAIGIAPWGIIENKEDLIGRDVTRPYQTMSNPLSKLSVLNNSHSHFILADNGT
TGKYGAEVKLRRQLEKHISLQKINTRLGQGVPLVCLIVEGGPNVISITLESLKEEPPVPV
VVCDGSGRASDIMSFAHKYCEEGGLITDDVRDQLLVTIQKTFNYSKSQSQQILLMVMECM
KKKELITVFRMGSEGQQDIEMAILTALLKGTNASAPDQLSLALAWNRVDIARNQIFVYGH
HLPPASALANSSGTVATTTERPKSPAAAPRNKAKARGKKGKGGKAKPEPPEETDPRKIEL
MRWVNSLEQAMMDALVLDRVDFVKLLIENGVNIHHFLTIPRLEELYNTRLGPANTLHVVV
RDVKKGNLPPDYQITLIDIGLVMEYLMGGAYRCNYTRKNFRALYNNLYGLKRPKALKMLG
LEDDEPRGKKKKGKKKKEEEVEIDVDDPEVCRFTYPFHELMVWAVLMKRQKMALFLWQRG
EEAMAKALVACKLYTAMAKESSEMVDDIAQDLDNNSKEFGQLAYELLDQSYKHDEQVAMK
LLTYELTNWSNSTCLKLAVAAKHRDFIAHTCSQMLLTDMWMGNLRMGKNPGLKVILGIIF
PPSILLLVDFKGEDQSYTADSEEGKDKDDDAGKDDVVSRKGDEEEGSSNVRRKPIGRRIY
EFYDAPFTKFWFNTISYLGYLMLYNYIILVKMERWPSIQEWTVIAYILTLGFEKVRQILM
SEPGKLKQKINVWLQEVWNITDLAAISTFLVGLLLRLQNEPLLGIGRVIYCIDIIFWYIR
VLDIFGVNKYLGPYVMMIGKMVTSLID
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
gcccagaaagcgtggatcgagaggatctttcagaagagagaatgtattcacatattcccc
agcaaggaccctacaagatgttcgtgtggtcagctcataacgcagcacgtggtgatcccg
ctgggcgctctgaccaacaagctgtcggaagagagccatcagctagtccagatagaccca
ccccagcaggagaggtggtctgtggccaaaaacacacagacctcccccacggatgccttc
gggaccatcgacttccagggtggaggcctcatcaacaaggcaatgtacatcagagtgtcc
catgactctaagccagacaatctgctccaactgatggtgaaagactggcagctggaactc
cccaacctgctcatctccatccacggaggcctgcagaactttgacctgcaacccaaactc
aaacaagttttagggaagggactcatcaaggctgcagtcaccaccggagcatggatcttc
actggtggagtcagcactggtgtgattcgtcacgtgggggatgccctgaaggaccactcc
tctaagtccagagggaaggtatgtgccatcggtatcgctccctggggcatcatagagaac
aaggaggacctcatcggtagagatgtaacacggccgtaccagaccatgtccaacccgctg
tccaagctgtctgtcctgaacaacagccactcccacttcatcctggccgacaacggcact
acagggaagtatggagcggaggtgaagctacgccgccagctggaaaaacacatctcactg
cagaagatcaacacacgcctgggccagggggtcccgttggtgtgtctgatagtagaggga
ggtcctaatgtcatctccatcaccctggagagtctgaaggaggaacctcccgtccccgtg
gtggtctgtgatggcagcgggagggcatcggacatcatgtccttcgctcacaaatactgc
gaggagggaggtctgataactgacgacgtgagggaccagctgctggtgaccatacagaag
accttcaactatagtaagagccaatcacagcagatcctgctcatggtcatggagtgcatg
aagaagaaggagctgataacagtgtttcgaatgggttctgaaggacagcaagatattgaa
atggccattctgactgctttattaaaaggaaccaacgcctctgccccggaccagctgagt
ctagctctggcctggaacagagtggacatagcacgcaaccagatctttgtctacggtcac
catctaccacctgccagtgccctagctaacagcagtggtaccgtagccactaccacagag
aggccgaagagtccagccgctgcccccaggaacaaggccaaggcccgggggaaaaagggg
aagggagggaaggcaaagcctgaaccaccagaggagactgaccccaggaagatagaacta
atgcgatgggtgaactctctggagcaggccatgatggatgccttggtgctggacagggtg
gactttgtcaagctgctgatagagaacggcgtcaacatccaccacttcctcaccattcct
cgcctggaggagctgtacaacacgagactgggtcctgctaacacgttgcatgttgtggtg
agagatgtcaagaagggcaacctcccgccagactaccagatcactctgattgacattggt
ctggtgatggagtacctgatgggtggggcttaccgctgtaactacaccaggaagaacttc
agggcactttacaacaacctctacgggctgaagaggccaaaagccttgaagatgctgggg
ctggaggacgacgagccgaggggaaagaagaagaaagggaagaagaagaaagaggaggag
gtagagatagatgtggacgaccctgaggtctgtcgcttcacctaccccttccacgagctg
atggtgtgggccgttctcatgaagcgccagaagatggcgctgtttctgtggcaacgtggg
gaggaggccatggccaaggctctggtggcctgtaagctatacacagccatggctaaagag
tcatctgaaatggtggacgatatcgcccaggacctggacaacaactccaaggagtttggc
cagcttgcctacgagctcctggaccagtcctataagcacgatgaacaggtggccatgaag
ctgctgacgtatgagctgaccaactggagcaactctacctgtctgaagctggccgtggcc
gccaagcacagagacttcatcgcccacacctgcagtcagatgctgctgaccgacatgtgg
atgggaaatctgagaatggggaagaaccctgggctgaaggtgattctgggcatcatattc
cctccatcaattctgctgctggtggacttcaaaggagaagaccagtcctacacagctgac
tctgaagaagggaaagacaaggacgatgacgctggcaaggatgacgttgtgtcaaggaag
ggggatgaagaggagggcagcagtaatgtcaggaggaagcccattggacggaggatctat
gagttctatgatgccccgttcaccaagttctggttcaacaccatctcctacctgggctac
ctgatgctgtataactacataatcctggtgaagatggagcgatggccgtccatccaggag
tggaccgtcattgcctacatcctaacgctcggcttcgagaaagtcagacagatcctaatg
tcagagcctgggaagctgaagcagaagatcaacgtatggctgcaagaggtctggaacatc
actgacctggcagccatctccaccttcctggttggccttctgctgaggctgcagaacgaa
cccctcctgggcatcggacgtgtcatctactgcatagacatcatcttctggtacatcagg
gtgctcgacatcttcggggtcaacaagtacctgggaccctatgtcatgatgattgggaaa
atggtaacatcattaattgattga
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