Oncorhynchus nerka (sockeye salmon): 115122773
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Entry
115122773 CDS
T07952
Symbol
gars
Name
(RefSeq) glycine--tRNA ligase
KO
K01880
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
115122773 (gars)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
one01007
]
115122773 (gars)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
one03016
]
115122773 (gars)
03029 Mitochondrial biogenesis [BR:
one03029
]
115122773 (gars)
Enzymes [BR:
one01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
115122773 (gars)
Amino acid related enzymes [BR:
one01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
115122773 (gars)
Transfer RNA biogenesis [BR:
one03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
115122773 (gars)
Mitochondrial biogenesis [BR:
one03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
115122773 (gars)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HGTP_anticodon
tRNA-synt_2b
Motif
Other DBs
NCBI-GeneID:
115122773
NCBI-ProteinID:
XP_029507880
EnsemblRapid:
ENSONEG00000007238
LinkDB
All DBs
Position
Unknown
AA seq
541 aa
AA seq
DB search
SLSETTNCPSRYDSAPVFLCSAHLQKLMSDKKCPAENKAEMEEVVTQMDNYTQQELTDLF
VKYSVKSPTTGNDVSAPHLFNLMFQTSIGPVGNMTGYLRPETAQGIFLNFKRLLEFNQGK
LPFAAAQIGNSFRNEISPRSGLIRVREFTMAEIEHFVDPTEKFHPKFPTVADLEIILYSS
KAQTSGQSGHIMRLGDAVEQGVINNSVLGYFIGRIYLYLTKVGVAKDKLRFRQHMDNEMA
HYACDCWDAETKTSYGWIEIVGCADRSCFDLLCHARATKVPLVAEKPLKEPKVVDIVQFE
PNKGAIGKAYKKDAKLVMEYLAVCDACFITEQEMLLNSNGEFAIETEGKTFKLTKDMVSV
KRFQKTLHVEEVVPNVIEPSFGIGRIMYSIFEHTFQVREGDEQRTFFSFPATVAPYKCSV
LPLSQNQEFMPFVKELSEAMTKQGVSHKVDDSSGSIGRRYARTDEIGVAFGITIDFDTVN
KTPHTATLRDRDSMRQIRAEVSELPGIIRDLANGVMTWAEVEDKYPIFEGQETSKKDTAE
E
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
tctttgtctgaaacaacaaactgtcccagtagatatgactctgcccctgtgtttctctgt
tcagctcacctccagaagctgatgtctgataagaagtgtcctgcagagaataaggccgag
atggaggaagtggtcactcagatggacaactacactcaacaggagttgactgacctcttt
gtgaaatacagtgtcaagtcccccaccacaggaaatgacgtttcagcccctcacctcttc
aacctgatgttccagacgtctattggaccagtgggaaacatgaccggctacttgaggcct
gaaacggctcagggaatcttcctcaacttcaagcgtctgttggaattcaaccagggaaag
cttcccttcgctgcggctcagattggcaactccttcaggaacgagatctcacctcgctca
ggactcatccgtgtcagagagttcaccatggctgagattgagcactttgtggacccgact
gagaagttccaccccaagttccctaccgtggctgacctggagatcatcctgtactcctcc
aaggcccagaccagtggccagtctggtcacatcatgaggctgggggatgctgtggagcag
ggggtgatcaataactccgtcctgggatatttcatcgggagaatctacctctacctcact
aaagtgggtgtggccaaagacaagcttcgcttccgtcagcacatggacaacgagatggcc
cactacgcctgtgactgctgggacgcagagaccaaaacatcctatggctggatcgagata
gtgggctgtgcggaccgctcctgtttcgacctgctgtgccacgcccgggctaccaaggtc
cctctagtggccgagaagcctcttaaagagcccaaagtagtcgatatcgtccagtttgag
cccaataagggagccatcggtaaagcctataagaaggacgccaaactagtgatggagtac
ctagctgtctgtgacgcgtgtttcatcactgaacaggagatgctgctcaacagcaacggg
gagttcgccatagagacggagggaaagacttttaaactcaccaaggacatggtcagtgtg
aagcggtttcagaagaccctgcatgtggaagaggtggtccctaatgtcatcgaaccctcc
tttggcatcggtagaatcatgtactccatcttcgagcacacgttccaagtcagagaggga
gacgaacagagaacgttcttcagcttccctgccactgtagctccatataaatgctccgtc
cttcctttgagccaaaaccaggaattcatgccttttgttaaggaactctctgaagcgatg
accaaacagggcgtgtcccacaaggtggacgactcgtcaggatccatcgggcggcgctac
gccagaacagacgagatcggagtggcgttcggcatcaccatcgactttgacacggtgaac
aagacgccccacaccgccactctgagggaccgcgactccatgaggcagatcagggccgag
gttagtgagttgccaggaatcatccgtgatctggcaaacggtgtcatgacttgggccgag
gtggaggacaagtaccccatctttgagggacaggagaccagcaagaaggacactgccgag
gaatga
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