Oncorhynchus nerka (sockeye salmon): 115122790
Help
Entry
115122790 CDS
T07952
Symbol
rnf115
Name
(RefSeq) E3 ubiquitin-protein ligase RNF115 isoform X1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115122790 (rnf115)
04121 Ubiquitin system [BR:
one04121
]
115122790 (rnf115)
Enzymes [BR:
one01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115122790 (rnf115)
Membrane trafficking [BR:
one04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
115122790 (rnf115)
Ubiquitin system [BR:
one04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115122790 (rnf115)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-RING_UBOX
zf-rbx1
zf-C3HC4
Zn_ribbon_19
zf-Nse
zf-RING_5
zf-ANAPC11
zf-C3HC4_3
zf-RING_16
C1_2
HypA
Motif
Other DBs
NCBI-GeneID:
115122790
NCBI-ProteinID:
XP_029507898
LinkDB
All DBs
Position
Unknown
AA seq
325 aa
AA seq
DB search
MAEAAAVPPHRFFCHCCKGEVSPKLPEYICPRCESGFIEEVTEDSSLLEGGTNGTDDTAT
QFAEQLWHLLFVERPFTVDGDSPDSEPRVPGGGVGVGSGGLGLGGLGGLGGLGGGPIGGS
VPAGLGGPLGGPLGGGEHWGPGRPPRLHSQRRYRSRGSSRPDRSPAVEGIVQQFLAGLFA
NSGVPGSPPLSWTGMLHSNPGDYAWGQGGLDAVITQLLGQFENTGPPPAEKEKISSIPTV
NVSQDQADCSMECPVCKEDFAVGEPVRQLPCNHFFHSDCIVPWLEMHDTCPVCRKGLNGE
DSNTQNPPESPSLNTDPRTQERWSF
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagctgcggcggttcccccgcatcggttcttctgtcattgttgtaagggagaa
gtaagccccaagctcccggagtacatctgtcccaggtgtgagtctggctttatagaggag
gtaacagaagattccagtctgctagagggtggcactaacgggacagatgacacagccaca
cagtttgcagagcagctgtggcacctgttgtttgtagagaggcctttcacagtggatggt
gacagtccagactcagagccccgggtccctggtggaggggttggggtaggatcagggggg
ttaggtctgggggggctgggagggctaggaggcctgggaggaggtcctatcggagggtcc
gtccctgctgggctaggaggacccctggggggtcctctgggagggggggaacactggggg
cccggtcgcccccctcgcctgcacagtcagcggaggtaccgctccagagggagcagcaga
cctgaccgctcacctgccgtagaggggatagtacaacagtttctggctggtctatttgcc
aactctggagttcctggctcacctcccctctcttggacggggatgctacactctaaccca
ggggactatgcttggggacaggggggactggacgcagtcatcacacagttgttaggtcag
tttgagaacacgggccctcctcctgcagagaaagagaagatctcctccatacctacagtc
aacgtgtctcaggatcaagcagactgcagtatggagtgtccggtgtgcaaggaggacttt
gcagtgggagagcccgtcagacagctaccctgcaaccacttcttccactcagactgtata
gtaccctggctggaaatgcatgatacgtgtcctgtgtgtaggaaggggttgaatggagaa
gacagcaacacccagaaccccccagaatccccctctctaaatacggacccccgcacacag
gagagatggtccttctga
DBGET
integrated database retrieval system
