Oncorhynchus nerka (sockeye salmon): 115122889
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Entry
115122889 CDS
T07952
Name
(RefSeq) nuclear receptor subfamily 2 group C member 1-A-like isoform X1
KO
K08543
testicular receptor 2
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115122889
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
one03310
]
115122889
Transcription factors [BR:
one03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
115122889
Nuclear receptors [BR:
one03310
]
2. Hepatocyte nuclear factor 4 like
2C. Testicular receptor
115122889
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
115122889
NCBI-ProteinID:
XP_029508012
LinkDB
All DBs
Position
Unknown
AA seq
624 aa
AA seq
DB search
MDRHTQRIQLVSADGGMMGHRIQIVTDQSTGQKIQIVTALEQGSGGKQQFILANADYSTP
GKVILAKQEASSPGKVILAAQDGSGVNQLLFASPDLSGQQIQFVTEGSDQALAKPVVEYC
VVCGDRASGRHYGAVSCEGCKGFFKRSIRKNLVYTCRGSGECVINKHHRNRCQYCRLQRC
MFLGMKQDSVQCERKPVEVSREKSINCAASTEKIYIRKNLCSPLAATPTFVTDKETARYY
KETARSASLLESSMLLNIQQPFPKLENTILVPTSPESNDPCQDDLSTLANVVTSLAHLNK
AREMNDVTDSNDLMGAEDTLSNGDSSMTDLQGDEQTACDITRAFDTLAKALNPGDGSAGD
SLEATMQLMSGDQSGPVVELEGPLLSDSHVPFKLMMPLPMPEYLNVNYICESASRLLFLS
MHWARSIPAFQALGGQDNDINLMKACWNELFALGLAQCSNVMNVSTILAAIINHLQTSLQ
DGTGGDEKLSPERVKLVMEHIWRMQEFCNSMAKLSPDVYEYAYLKAIILFSPDHPGIDNT
LQIERFQEKAYMELQDYVTRTYPEDSYRLSKLLLRLPALRLMSSVVTEELFFTGLIGNVQ
IDSIIPYILKMETTDYNSQVATGV
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggacagacacactcagaggattcagctggtctcagctgacggtggcatgatgggacat
cgtatccagatcgtgacggaccagtcgacgggccagaagatccagatcgtgacggcgttg
gagcagggttctggtggcaagcagcagtttatcctggctaatgcagactactctacgcca
ggcaaggtaatcctagccaagcaagaggcctcgtccccgggaaaggtgatcctggcggcc
caagacggttcaggggtcaaccagctgctgtttgcctcacctgacctgtccggccagcag
atccagtttgtgacagaagggtcagaccaggcacttgccaagcctgtggtggagtactgt
gtggtgtgtggagacagggcctcaggccgtcactacggggcagtgagctgtgagggctgt
aagggtttcttcaagcgcagcatcaggaagaacctggtgtatacatgccgggggtctgga
gagtgtgtcatcaacaagcaccacaggaaccgctgccagtactgcagactgcagcgctgc
atgttcctgggcatgaaacaggactctgtccagtgtgagaggaagccggtggaagtctcc
agagagaagtctatcaactgtgctgcgtctacagagaagatctacatcaggaagaacctg
tgtagtcccctggctgccacgcccaccttcgtcactgacaaggagaccgccaggtactac
aaggagacagccaggtcagccagtttgctggagtcaagcatgctcctgaacatccagcag
ccttttcccaagctagagaacaccatcctggtccctacatcccctgaatcgaatgacccg
tgtcaggacgacctgagcacgctggccaatgtggtgacgtcactggcccacttgaacaag
gcccgggagatgaacgatgtcaccgacagcaatgacctgatgggcgcagaagacaccctt
agcaatggagacagctccatgacggatctccaaggagacgaacagactgcctgtgacatc
acccgagcgtttgacactctggccaaggccctgaaccctggggacggctcagcaggagac
tctctggaagccaccatgcagctgatgtcaggagaccagtctggtcccgtggtggagctg
gaggggcctctactctcagacagccacgtccccttcaagctgatgatgccgttgcccatg
ccggagtaccttaatgtgaactacatctgtgagtcagcctcgcggctcctcttcctgtcc
atgcactgggcacgctccatacctgccttccaagccttgggtggtcaggataatgacatt
aacctgatgaaggcctgttggaacgagctgtttgctctgggcctggctcaatgttccaat
gtcatgaacgtctccactatcctggctgccatcatcaaccaccttcagaccagcctacaa
gatggtacaggaggtgatgagaagctgtccccagagagagtgaagctggtgatggaacac
atctggaggatgcaggagttctgtaacagcatggccaagctatcccctgacgtttatgaa
tacgcctacctgaaagccatcatcctcttcagccctgaccacccaggtatagacaacacc
ctacagattgagcgtttccaggagaaagcctacatggagttacaggattatgtaactcgg
acctaccctgaagactcgtatcggttatccaagctgttgcttcgtctccctgccctgcgg
cttatgagttcagtggtgacagaggagctcttcttcactggcctcatcggcaacgttcag
atagacagcatcatcccttacatcctcaagatggagaccaccgactacaacagccaggtg
gccactggcgtctga
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