Oncorhynchus nerka (sockeye salmon): 115122994
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Entry
115122994 CDS
T07952
Name
(RefSeq) E3 ubiquitin-protein ligase KCMF1-like isoform X1
KO
K22376
E3 ubiquitin-protein ligase KCMF1 [EC:
2.3.2.27
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
one04121
]
115122994
Enzymes [BR:
one01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115122994
Ubiquitin system [BR:
one04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115122994
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-Di19
ZZ
Zn_SUZ12
zf-C2H2
Di19_C
SWIRM-assoc_1
ATG14
zf-C2HC_2
Motif
Other DBs
NCBI-GeneID:
115122994
NCBI-ProteinID:
XP_029508139
LinkDB
All DBs
Position
Unknown
AA seq
422 aa
AA seq
DB search
MSRHEGQGIGQNGPSVNCLSPGVSCDACLKGNFRGRRYKCLICYDYDLCASCYEGGATTT
RHTTEHAMQCVLTRVDFDLYYGGEALSVEQPQAFTCPYCGRMGYTETSLQEHVAAEHTET
SSEVICPICASLPGGDPNHVTDDFAAHLTLEHRAPRDLDESSGVRHVRRMFHPGRGLGGP
RARRSNMHFTSSTSGGSSTTQTSTQSSNYNREAMDPIAELLSQLSGVRRSAGGQLSSGPS
ASQLQQLQMQLQLERHQTQAARQQLETARSATQRSSRTSTNAGLNANPSPGHHNANPSSN
STSPNPGHHVFTTHTQQSNSQFLLNRLSEPRLSEAERQLSEGQWADRSLFVTELLLSTLL
ADPDHSEDDDLHDYHDAVIRGSDAFSDFGTFGDMGCVEVMTLDVALENLNLREQKEQRPP
PL
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgtcatgaaggacagggtattggtcaaaatggtccgtctgtgaattgtctttcc
ccaggtgtgagctgcgatgcgtgtttgaagggtaacttccgggggcggcggtacaagtgt
ttaatttgctacgactacgacctgtgtgcgtcgtgctacgagggcggagccacgaccacc
agacacacaacagaacacgccatgcagtgcgtactaaccagggtcgacttcgacctatac
tatggaggagaggccttgtcagtggagcaaccacaggcctttacctgtccctactgtggc
aggatgggctacacggagacctctcttcaggagcacgttgctgcagagcacacagagacc
tcctcagaggtgatctgtcccatatgtgcttcgctgcccggcggggaccctaatcacgtg
accgacgacttcgctgctcatctcacacttgaacacagagcccccagagacttggatgag
tcgagcggggtgcggcacgtgcgtaggatgttccacccgggtcggggtctaggggggccg
agggcccgtcgatccaacatgcacttcacctcctcaacctccggggggagctctaccaca
cagacctctacacagagctccaactacaacagggaggccatggatcctatagctgagctt
ctctcccagttgtcgggggtgcgtaggtcggcgggcggccagctgagttcaggtccttca
gcctcccagctacagcagctccagatgcagctccagttggagcggcaccaaacccaggct
gccagacagcagttggagacggcccggagtgccacgcaacgcagcagccgtacctccacc
aacgcagggctgaatgccaatccaagcccagggcatcacaacgccaaccccagttccaac
tctaccagccccaacccagggcatcacgtgttcactacacacacacagcagagcaactcc
cagttcctcctcaacagactgagtgagccgaggttgtcggaggcggagcgtcagctgagt
gagggccagtgggcggaccgttctctcttcgtcacggagctcctcctctccaccctgctg
gccgatcccgaccacagcgaagatgacgatctccatgactaccacgacgccgtgatccga
ggttctgacgcgttcagtgatttcggcaccttcggagacatgggctgcgtggaggtcatg
accttggacgtggcgttggagaacctcaacctccgagaacaaaaggagcagcgacccccg
cctctttga
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