Oncorhynchus nerka (sockeye salmon): 115123124
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Entry
115123124 CDS
T07952
Symbol
fdps
Name
(RefSeq) farnesyl pyrophosphate synthase
KO
K00787
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one00900
Terpenoid backbone biosynthesis
one01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
one00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
115123124 (fdps)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
one01006
]
115123124 (fdps)
Enzymes [BR:
one01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
115123124 (fdps)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
115123124 (fdps)
Prenyltransferases [BR:
one01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
115123124 (fdps)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
Pfc11_Rna14-15-ID
MAAL_C
Motif
Other DBs
NCBI-GeneID:
115123124
NCBI-ProteinID:
XP_029508298
LinkDB
All DBs
Position
Unknown
AA seq
433 aa
AA seq
DB search
MKPCGPTALRSLGKAVGTGLVQKLCDKINTNVVKNYNTPNSQTSVCVVLSHLTGKEIPVK
RDLPNRLSLLSKDKIIMGDSSCSNGTHHSGAVQSDPQLFEAQFEELVTELTEQDFTDSVL
ADALNRLREVLHYNTPGGKRNRGLSVIGSLRELVPPTELTQDAVRRALLVGWCIELLQAF
FLVADDIMDASVTRRGQPCWYKRERVGLDAINDSFLLEGSIYRLLRRHCRAQPYYVHLLE
LFTETSFQTELGQALDLMTAPPGQIDLNRFTMERYKAIVKYKTAFYSFYLPVAAAMYMAG
IDSEEEHNHAKHILLEMGEFFQIQDDYLDCYGDPAVTGKIGTDIQDNKCGWLVVTALGVM
TPVQRAELESCYGRHDSVEKVKALYNTLQMPTLYHQYEDDSYQRLQKLIARHAQNLPHAV
FLNFAKKIYKRNK
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgaagccttgtggtcccacggccctgcgatcactcgggaaggctgtcgggacaggttta
gttcagaagctatgcgataaaataaacaccaacgtggtcaaaaactacaatacaccgaat
tcccaaacttctgtgtgcgtcgtactctcccatttgacaggtaaagagataccagtgaag
agggatttgccaaacagactgtcactactgagcaaggacaagataatcatgggtgacagt
agttgcagcaacgggacccaccactcgggggcggtgcagtcagacccacagctgtttgag
gcccagtttgaggagctggtgaccgagctcacagagcaggacttcacagactctgtcctc
gctgacgctctcaacagactccgagaggtgttgcattacaacactcctggaggaaaaaga
aacagaggtctgtctgtgattggctctttgagggagcttgttcctcccactgagctgacc
caggatgctgtgcgacgggccctgctggttggctggtgcattgagctgctccaggcgttc
ttcttggtagctgatgacatcatggatgcttcagtgactcggagaggtcagccctgctgg
tacaagagggagagagtgggtctggatgccatcaatgattccttcctcctggagggatcc
atctacagactactgcgcagacactgcagggcacagccctactacgtacacctattggag
ctcttcactgagacgtccttccagacagagctgggccaggcactggacctgatgaccgct
cctcctggtcaaatagacctcaaccgcttcaccatggagagatataaggccatagtaaag
tacaagactgccttctactccttctacctccctgtggcagcagccatgtacatggcgggc
atcgacagtgaagaggaacacaaccacgccaaacatatcttactggagatgggagagttc
ttccagatacaggatgactacctggattgctatggcgacccggcggtgacagggaagatt
ggaacagacatccaggacaacaaatgcggctggctggtagtgactgctctaggggtcatg
accccagtacaaagggcagagctggagtcatgttatggtcggcatgacagtgtggagaag
gtgaaagcactgtacaacaccctacagatgcccaccctgtaccaccaatacgaagacgac
agctatcagcgcttacagaaactcatcgcgcgtcacgcccaaaaccttccacacgcagtt
ttcctcaacttcgccaagaaaatctacaagagaaacaagtga
DBGET
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